MS4A1 (B-lymphocyte antigen CD20) variants and mutations
MS4A1 (also known as B-lymphocyte antigen CD20) is a human protein-coding gene encoding a b-lymphocyte antigen CD20 protein. Its expression spans much of B-cell development and contributes to calcium signaling and B-cell activation. Its stable surface expression makes it a major therapeutic target for B-cell depletion in lymphoma, leukemia, and autoimmune disease. This analysis covers 703 MS4A1 variants and mutations. Of these, 67% have computational variant effect predictions. Disease context includes B-cell chronic lymphocytic leukemia, diffuse large B-cell lymphoma, and follicular lymphoma. Example MS4A1 variants include T2K, T2T, and T3I.
Variant analysis overview
- Gene: MS4A1
- Protein: B-lymphocyte antigen CD20
- UniProt accession: P11836
- Organism: Homo sapiens
- Variants analyzed: 703
- Variant scope: all variants
- Completed: 2026-08-22
Variant and mutation evidence
- Variant composition: 520 unspecified-consequence records; 86 synonymous variants; 75 missense variants; 5 splice-region variants; 3 stop-gained variants; 3 in-frame deletions; 8 frameshift variants; 4 substitution
- Prediction scores: 470 variants have prediction scores (67% of the analyzed set).
Clinical, disease, and population context
- Disease context: 25 disease associations are represented. Top associations: B-cell chronic lymphocytic leukemia, diffuse large B-cell lymphoma, follicular lymphoma, rheumatoid arthritis, non-Hodgkin lymphoma, multiple sclerosis, neoplasm, acute lymphoblastic leukemia, granulomatosis with polyangiitis, relapsing-remitting multiple sclerosis, microscopic polyangiitis, pemphigus.
Protein structure and variant hotspots
- Protein features: 4 transmembrane segments; 3 post-translational modification sites.
- Structural context: 208 variants have structural context.
- PTM context: 7 variants overlap post-translational modification sites.
Data sources
Evidence in this analysis draws on EBI Proteins Variation, UniProt, gnomAD v4, EuropePMC, 3D Hotspot Analysis, Interaction Network Analysis, Protein Data Bank, AlphaFold DB, gnomAD constraint, Open Targets, MaveDB, LitVar.
Notable MS4A1 variants
Examples include T2K, T2T, T3I, P4S, P4T, P4L, P4P, R5G. Listed records include available protein-change notation, database identifiers, clinical classifications, computational predictions, population evidence, experimental measurements, and disease context.
- T2K (p.Thr2Lys), NCI-TCGA Cosmic COSV6194, cosmic curated COSV61942, Variant assessed as somatic; moderate impact.
- T2T (p.Thr2Thr), gnomAD 11-60462380-A-C, CADD 4.86
- T3I (p.Thr3Ile), gnomAD rs1208417279, REVEL 0.14, MetaLR 0.14
- P4S (p.Pro4Ser), rs200768099, ClinGen CA6024848, ClinVar RCV002046682, ClinVar RCV004038819, REVEL 0.18, MetaLR 0.21, Uncertain significance, not specified; not provided
- P4T (p.Pro4Thr), gnomAD 11-60462384-C-A, REVEL 0.18, CADD 23.90
- P4L (p.Pro4Leu), gnomAD 11-60462385-C-T, REVEL 0.25, CADD 25.70
- P4P (p.Pro4Pro), rs202047596, gnomAD 11-60462386-C-T, CADD 13.30
- R5G (p.Arg5Gly), Ensembl rs2086254854
- R5K (p.Arg5Lys), cosmic curated COSV61943
- N6I (p.Asn6Ile), NCI-TCGA Cosmic COSV1006, cosmic curated COSV10061, Variant assessed as somatic; moderate impact.
- N6S (p.Asn6Ser), gnomAD rs1483638139, REVEL 0.04, MetaLR 0.07
- S7* (p.Ser7Ter), ESP rs369817025, ExAC rs369817025, TOPMed rs369817025, gnomAD rs369817025, CADD 36.00
- S7S (p.Ser7Ser), gnomAD 11-60462395-A-C, CADD 9.44
- V8G (p.Val8Gly), gnomAD rs1249627588, REVEL 0.06, MetaLR 0.05
- V8I (p.Val8Ile), gnomAD 11-60462396-G-A, REVEL 0.03, CADD 0.64
- V8V (p.Val8Val), gnomAD 11-60462398-A-C, CADD 11.40
- N9K (p.Asn9Lys), Ensembl rs2135197138, Uncertain significance, not specified
- N9T (p.Asn9Thr), cosmic curated COSV10466, TOPMed rs917874598, REVEL 0.08, MetaLR 0.02
- N9N (p.Asn9Asn), gnomAD 11-60462401-T-C, CADD 11.00
- G10A (p.Gly10Ala), Ensembl rs2135197141
- G10E (p.Gly10Glu), Ensembl rs2135197141, REVEL 0.22, MetaLR 0.28
- G10R (p.Gly10Arg), NCI-TCGA Cosmic COSV1006, NCI-TCGA Cosmic COSV6194, cosmic curated COSV61942, Variant assessed as somatic; moderate impact.
- G10W (p.Gly10Trp), cosmic curated COSV10061
- T11I (p.Thr11Ile), Ensembl rs2135197145
- T11N (p.Thr11Asn), NCI-TCGA Cosmic COSV6194, cosmic curated COSV61941, Variant assessed as somatic; moderate impact.
- T11S (p.Thr11Ser), NCI-TCGA Cosmic COSV6194, Variant assessed as somatic; moderate impact.
- F12S (p.Phe12Ser), ExAC rs763588373, TOPMed rs763588373, gnomAD rs763588373, REVEL 0.06, MetaLR 0.05, Uncertain significance
- F12Y (p.Phe12Tyr), rs763588373, ClinGen CA6024850, ClinVar RCV004335726, ClinVar RCV005104080, REVEL 0.07, MetaLR 0.05, Uncertain significance, not specified; not provided
- F12L (p.Phe12Leu), gnomAD 11-60462410-C-A, REVEL 0.08, CADD 11.90
- P13L (p.Pro13Leu), rs143807889, ClinGen CA6024851, cosmic curated COSV61942, ClinVar RCV001969733, REVEL 0.08, MetaLR 0.02, Uncertain significance, not specified; not provided
- P13Q (p.Pro13Gln), cosmic curated COSV10887
- A14G (p.Ala14Gly), cosmic curated COSV61942, REVEL 0.10, MetaLR 0.04
- A14S (p.Ala14Ser), NCI-TCGA Cosmic COSV6194, Variant assessed as somatic; moderate impact.
- A14T (p.Ala14Thr), rs766227660, ClinGen CA6024853, cosmic curated COSV61942, ClinVar RCV002036627, REVEL 0.10, MetaLR 0.04, Uncertain significance, not provided
- A14V (p.Ala14Val), 1000Genomes rs568202047, ExAC rs568202047, TOPMed rs568202047, gnomAD rs568202047, REVEL 0.09, MetaLR 0.03
- E15D (p.Glu15Asp), rs2135197184, ClinGen CA380597664, ClinVar RCV004350605, Likely benign, not specified
- E15K (p.Glu15Lys), NCI-TCGA Cosmic COSV6194, cosmic curated COSV61941, Variant assessed as somatic; moderate impact.
- P16L (p.Pro16Leu), rs768892705, ClinGen CA222761232, cosmic curated COSV10524, ClinVar RCV002584461, REVEL 0.10, MetaLR 0.09, Uncertain significance, not provided
- P16Q (p.Pro16Gln), cosmic curated COSV61941
- P16S (p.Pro16Ser), Ensembl rs2135197187, REVEL 0.09, MetaLR 0.04
- P16P (p.Pro16Pro), rs754610368, gnomAD 11-60462422-A-G, CADD 8.18
- M17I (p.Met17Ile), rs752311016, ClinGen CA6024857, cosmic curated COSV61941, ClinVar RCV003550295, AlphaMissense 0.15, MetaLR 0.04, Uncertain significance, not provided
- M17T (p.Met17Thr), rs201491900, ClinGen CA6024856, ClinVar RCV000595825, ClinVar RCV004024840, AlphaMissense 0.07, MetaLR 0.04, Uncertain significance, not provided; not specified
- K18N (p.Lys18Asn), cosmic curated COSV10061
- G19C (p.Gly19Cys), rs2495398622, ClinGen CA380597687, ClinVar RCV003031232, Uncertain significance, not provided
- G19D (p.Gly19Asp), rs1173252862, NCI-TCGA Cosmic COSV1006, cosmic curated COSV10061, TOPMed rs1173252862, REVEL 0.04, MetaLR 0.09, Variant assessed as somatic; moderate impact.
- G19G (p.Gly19Gly), rs200040848, gnomAD 11-60462431-C-T, CADD 4.00
- P20H (p.Pro20His), cosmic curated COSV99062
- P20L (p.Pro20Leu), rs2135197222, ClinGen CA380597701, NCI-TCGA Cosmic COSV1006, cosmic curated COSV10061, AlphaMissense 0.10, MetaLR 0.14, Uncertain significance, not specified; not provided
- P20S (p.Pro20Ser), Ensembl rs2135197220, REVEL 0.04, MetaLR 0.09
- P20P (p.Pro20Pro), rs1273768917, gnomAD 11-60462434-T-C, CADD 5.09
- I21F (p.Ile21Phe), ExAC rs755552110, gnomAD rs755552110, REVEL 0.02, MetaLR 0.03
- I21L (p.Ile21Leu), ExAC rs755552110, gnomAD rs755552110, Uncertain significance, not specified
- I21T (p.Ile21Thr), gnomAD rs1230185096, REVEL 0.03, MetaLR 0.02
- I21V (p.Ile21Val), ExAC rs755552110, gnomAD rs755552110
- A22D (p.Ala22Asp), rs2135197243, ClinGen CA380597721, ClinVar RCV003714331, AlphaMissense 0.11, MetaLR 0.04, Uncertain significance, not provided
- A22S (p.Ala22Ser), cosmic curated COSV61941
- A22T (p.Ala22Thr), ExAC rs779510338, gnomAD rs779510338, REVEL 0.01, MetaLR 0.04
- A22V (p.Ala22Val), NCI-TCGA Cosmic COSV6194, cosmic curated COSV61941, Ensembl rs2135197243, REVEL 0.00, AlphaMissense 0.11, Variant assessed as somatic; moderate impact.
- A22A (p.Ala22Ala), rs1343328268, gnomAD 11-60462440-T-C, CADD 5.19
- M23I (p.Met23Ile), TOPMed rs1424571333
- M23L (p.Met23Leu), NCI-TCGA Cosmic COSV6194, cosmic curated COSV61941, Variant assessed as somatic; moderate impact.
- M23V (p.Met23Val), rs1204983091, ClinGen CA380597728, ClinVar RCV001917409, TOPMed rs1204983091, REVEL 0.01, MetaLR 0.04, Uncertain significance, not provided
- Q24* (p.Gln24Ter), rs201354938, ClinGen CA6024860, ClinVar RCV002962782, 1000Genomes rs201354938, CADD 31.00, Uncertain significance
- Q24K (p.Gln24Lys), 1000Genomes rs201354938, ExAC rs201354938, TOPMed rs201354938, gnomAD rs201354938, REVEL 0.03, MetaLR 0.05, Uncertain significance, not provided
- S25C (p.Ser25Cys), NCI-TCGA Cosmic COSV6194, cosmic curated COSV61941, Variant assessed as somatic; moderate impact.
- S25Y (p.Ser25Tyr), rs2495398726, ClinGen CA380597762, ClinVar RCV002634960, REVEL 0.12, MetaLR 0.04, Uncertain significance, not provided
- S25S (p.Ser25Ser), gnomAD 11-60462449-T-C, CADD 6.21
- G26C (p.Gly26Cys), NCI-TCGA Cosmic COSV1006, cosmic curated COSV10061, Variant assessed as somatic; moderate impact.
- G26D (p.Gly26Asp), gnomAD rs1453889572, Uncertain significance
- G26S (p.Gly26Ser), Ensembl rs2135197266, REVEL 0.05, MetaLR 0.04
- G26V (p.Gly26Val), rs1453889572, ClinGen CA380597779, ClinVar RCV002908698, gnomAD rs1453889572, REVEL 0.00, MetaLR 0.04, Uncertain significance, not provided
- P27L (p.Pro27Leu), Ensembl rs2135197289
- P27S (p.Pro27Ser), cosmic curated COSV61941, ESP rs374943331, ExAC rs374943331, gnomAD rs374943331
- P27T (p.Pro27Thr), ESP rs374943331, ExAC rs374943331, gnomAD rs374943331
- K28* (p.Lys28Ter), ExAC rs780340225, gnomAD rs780340225, CADD 32.00
- K28T (p.Lys28Thr), gnomAD 11-60462457-A-C, REVEL 0.08, CADD 13.60
- P29L (p.Pro29Leu), rs2135197301, ClinGen CA380597812, ClinVar RCV004170981, Ensembl rs2135197301, REVEL 0.01, MetaLR 0.03, Uncertain significance, not specified
- P29S (p.Pro29Ser), gnomAD rs200970156, REVEL 0.01, MetaLR 0.03
- P29A (p.Pro29Ala), gnomAD 11-60462459-C-G, REVEL 0.00, CADD 0.01
- L30I (p.Leu30Ile), Ensembl rs2135197303
- L30L (p.Leu30Leu), rs900234715, gnomAD 11-60462464-C-T, CADD 2.72
- F31L (p.Phe31Leu), NCI-TCGA Cosmic COSV1006, cosmic curated COSV10061, Variant assessed as somatic; moderate impact.
- R32K (p.Arg32Lys), Ensembl rs2135197311
- R32S (p.Arg32Ser), cosmic curated COSV10591
- R32W (p.Arg32Trp), TOPMed rs2086255949
- R32G (p.Arg32Gly), gnomAD 11-60462468-A-G, REVEL 0.10, CADD 7.61
- R33G (p.Arg33Gly), TOPMed rs1222925482, gnomAD rs1222925482, REVEL 0.14, MetaLR 0.07
- R33K (p.Arg33Lys), rs747239876, ClinGen CA6024863, cosmic curated COSV61941, ClinVar RCV003691420, REVEL 0.06, MetaLR 0.03, Uncertain significance, not provided
- R33M (p.Arg33Met), ExAC rs747239876, gnomAD rs747239876, REVEL 0.09, MetaLR 0.07, Uncertain significance
- R33R (p.Arg33Arg), rs201675666, gnomAD 11-60462473-G-A, CADD 5.60
- M34K (p.Met34Lys), ExAC rs776822308, gnomAD rs776822308, REVEL 0.04, MetaLR 0.04
- M34T (p.Met34Thr), ExAC rs776822308, gnomAD rs776822308, REVEL 0.01, MetaLR 0.04, Uncertain significance, not specified
- M34L (p.Met34Leu), gnomAD 11-60462474-A-T, REVEL 0.01, CADD 0.44
- S35F (p.Ser35Phe), ExAC rs762003025, gnomAD rs762003025, REVEL 0.05, MetaLR 0.09
- S35Y (p.Ser35Tyr), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- S36* (p.Ser36Ter), NCI-TCGA TCGA novel, Variant assessed as somatic; high impact.
- S36S (p.Ser36Ser), rs1166534226, gnomAD 11-60462482-A-G, CADD 0.22
- L37R (p.Leu37Arg), rs2495399013, ClinGen CA380597929, ClinVar RCV003580400, Uncertain significance, not provided
- L37V (p.Leu37Val), NCI-TCGA Cosmic COSV1006, cosmic curated COSV10061, REVEL 0.09, MetaLR 0.02, Variant assessed as somatic; moderate impact.
- L37L (p.Leu37Leu), rs200805059, gnomAD 11-60462485-G-C, CADD 9.82
- V38E (p.Val38Glu), Ensembl rs2135197352
- V38V (p.Val38Val), rs1405909633, gnomAD 11-60462488-G-A, CADD 11.20
- G39C (p.Gly39Cys), cosmic curated COSV61942
- G39D (p.Gly39Asp), Ensembl rs2135197374, REVEL 0.21, MetaLR 0.11
- G39S (p.Gly39Ser), rs1322248141, ClinGen CA380597954, ClinVar RCV002740050, TOPMed rs1322248141, REVEL 0.12, MetaLR 0.05, Uncertain significance, not provided
- G39G (p.Gly39Gly), gnomAD 11-60462491-C-T, CADD 8.10
- P40H (p.Pro40His), rs773222759, ClinGen CA6024868, ClinVar RCV002018844, ExAC rs773222759, REVEL 0.25, MetaLR 0.14, Uncertain significance, not provided
- P40S (p.Pro40Ser), Ensembl rs2135197390
- P40T (p.Pro40Thr), Ensembl rs2135197390
- T41K (p.Thr41Lys), 1000Genomes rs147754874, ESP rs147754874, ExAC rs147754874, TOPMed rs147754874, REVEL 0.13, MetaLR 0.09, Uncertain significance, not provided
- T41M (p.Thr41Met), rs147754874, ClinGen CA6024870, cosmic curated COSV61942, ClinVar RCV001955333, REVEL 0.10, MetaLR 0.11, Uncertain significance, not specified; not provided
- T41S (p.Thr41Ser), rs2135197406, ClinGen CA380597989, ClinVar RCV003675672, Ensembl rs2135197406, AlphaMissense 0.17, MetaLR 0.06, Uncertain significance, not provided
- T41R (p.Thr41Arg), gnomAD 11-60462496-C-G, REVEL 0.12, CADD 22.70
- T41T (p.Thr41Thr), rs150061756, gnomAD 11-60462497-G-A, CADD 2.56
- Q42L (p.Gln42Leu), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- Q42* (p.Gln42Ter), gnomAD 11-60462498-C-T, CADD 34.00
- S43I (p.Ser43Ile), 1000Genomes rs767323323, ExAC rs767323323, gnomAD rs767323323, REVEL 0.05, MetaLR 0.05
- S43N (p.Ser43Asn), NCI-TCGA Cosmic COSV1006, cosmic curated COSV10061, 1000Genomes rs767323323, ExAC rs767323323, REVEL 0.02, MetaLR 0.04, Variant assessed as somatic; moderate impact.
- S43S (p.Ser43Ser), gnomAD 11-60462503-C-T, CADD 8.48
- F45L (p.Phe45Leu), cosmic curated COSV61942, TOPMed rs1299992924, gnomAD rs1299992924, REVEL 0.17, MetaLR 0.09
- F45Y (p.Phe45Tyr), cosmic curated COSV61941, REVEL 0.22, MetaLR 0.16
- M46I (p.Met46Ile), cosmic curated COSV61942
- M46V (p.Met46Val), TOPMed rs1221258124, gnomAD rs1221258124, REVEL 0.02, MetaLR 0.04
- M46del (p.Met46del), gnomAD 11-60462509-CATG-, CADD 17.00
- M46R (p.Met46Arg), gnomAD 11-60462511-T-G, REVEL 0.03, CADD 18.40
- R47R (p.Arg47Arg), rs752256650, gnomAD 11-60462515-G-A, CADD 10.30
- E48K (p.Glu48Lys), cosmic curated COSV61941, REVEL 0.24, MetaLR 0.15
- E48V (p.Glu48Val), gnomAD rs1359031336
- S49F (p.Ser49Phe), cosmic curated COSV61943, REVEL 0.16, MetaLR 0.11
- S49Y (p.Ser49Tyr), NCI-TCGA Cosmic COSV6194, Variant assessed as somatic; moderate impact.
- S49P (p.Ser49Pro), gnomAD 11-60462519-T-C, REVEL 0.15, CADD 22.70
- K50N (p.Lys50Asn), NCI-TCGA Cosmic COSV6194, cosmic curated COSV61942, Ensembl rs2086256625, Variant assessed as somatic; moderate impact.
- K50E (p.Lys50Glu), gnomAD 11-60462522-A-G, REVEL 0.26, CADD 24.10
- T51A (p.Thr51Ala), gnomAD rs2086256652, REVEL 0.01, MetaLR 0.00
- T51I (p.Thr51Ile), TOPMed rs1210984901, gnomAD rs1210984901, REVEL 0.01, MetaLR 0.01
- T51S (p.Thr51Ser), gnomAD 11-60462524-G-GTC, CADD 24.40
- T51T (p.Thr51Thr), rs553023287, gnomAD 11-60462527-T-C, CADD 7.30
- L52F (p.Leu52Phe), cosmic curated COSV61943, Ensembl rs2086256808, REVEL 0.29, MetaLR 0.06
- L52S (p.Leu52Ser), Ensembl rs1565194218, REVEL 0.31, MetaLR 0.10
- L52V (p.Leu52Val), ESP rs202217903, ExAC rs202217903, TOPMed rs202217903, gnomAD rs202217903, REVEL 0.31, MetaLR 0.06
- p.Leu52 Gly53delinsTrp, gnomAD 11-60462528-TTGG-, CADD 18.30
- L52L (p.Leu52Leu), rs202217903, gnomAD 11-60462528-T-C, CADD 1.61
- G53E (p.Gly53Glu), rs1210730619, NCI-TCGA Cosmic COSV1006, NCI-TCGA Cosmic COSV6194, cosmic curated COSV61941, REVEL 0.52, MetaLR 0.11, Variant assessed as somatic; moderate impact.
- G53R (p.Gly53Arg), rs2086256871, ClinGen CA380598230, ClinVar RCV002976169, TOPMed rs2086256871, REVEL 0.56, MetaLR 0.12, Uncertain significance, not provided
- G53V (p.Gly53Val), NCI-TCGA Cosmic COSV1006, cosmic curated COSV10061, NCI-TCGA Cosmic COSV6194, Variant assessed as somatic; moderate impact.
- G53G (p.Gly53Gly), rs2086256930, gnomAD 11-60462533-G-A, CADD 19.10
- A54T (p.Ala54Thr), Ensembl rs2135198059
- A54V (p.Ala54Val), gnomAD rs1186650634, REVEL 0.19, MetaLR 0.02
- A54L (p.Ala54Leu), gnomAD 11-60462532-G-GCC, CADD 27.40
- A54S (p.Ala54Ser), gnomAD 11-60463002-G-T, REVEL 0.26, CADD 26.30
- V55D (p.Val55Asp), Ensembl rs935105674
- V55I (p.Val55Ile), Ensembl rs2135198063, REVEL 0.06, MetaLR 0.01
- Q56* (p.Gln56Ter), gnomAD rs1366625386, CADD 37.00
- Q56E (p.Gln56Glu), gnomAD 11-60463008-C-G, REVEL 0.38, CADD 24.30
- Q56H (p.Gln56His), gnomAD 11-60463010-G-T, REVEL 0.40, CADD 24.60
- M58I (p.Met58Ile), NCI-TCGA Cosmic COSV6194, cosmic curated COSV61941, Variant assessed as somatic; moderate impact.
- N59H (p.Asn59His), Ensembl rs370887454
- N59N (p.Asn59Asn), gnomAD 11-60463019-T-C, CADD 8.98
- G60V (p.Gly60Val), Ensembl rs2135198078
- G60R (p.Gly60Arg), gnomAD 11-60463020-G-A, REVEL 0.51, CADD 29.10
- G60E (p.Gly60Glu), gnomAD 11-60463021-G-A, REVEL 0.48, CADD 27.40
- G60G (p.Gly60Gly), rs1473555726, gnomAD 11-60463022-G-T, CADD 9.26
- L61F (p.Leu61Phe), TOPMed rs2086261115, REVEL 0.23, MetaLR 0.02
- L61I (p.Leu61Ile), gnomAD 11-60463023-C-A, REVEL 0.21, CADD 22.30
- L61L (p.Leu61Leu), rs775234557, gnomAD 11-60463025-C-T, CADD 10.10
- F62L (p.Phe62Leu), ExAC rs760191432, gnomAD rs760191432
- F62F (p.Phe62Phe), rs763667959, gnomAD 11-60463028-C-T, CADD 13.70
- H63L (p.His63Leu), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- H63Q (p.His63Gln), gnomAD 11-60463031-C-A, REVEL 0.27, CADD 22.60
- H63H (p.His63His), gnomAD 11-60463031-C-T, CADD 8.07
- I64V (p.Ile64Val), rs2135198098, ClinGen CA380598486, ClinVar RCV002019708, Ensembl rs2135198098, REVEL 0.08, MetaLR 0.01, Uncertain significance, not provided
- I64I (p.Ile64Ile), rs1479850440, gnomAD 11-60463034-T-C, CADD 8.40
- A65V (p.Ala65Val), rs146626926, ClinGen CA6024895, ClinVar RCV001001012, ClinVar RCV005438933, REVEL 0.12, MetaLR 0.01, Uncertain significance, Immunodeficiency, common variable, 5; not specified
- A65A (p.Ala65Ala), rs1402540085, gnomAD 11-60463037-C-T, CADD 9.64
- L66M (p.Leu66Met), NCI-TCGA Cosmic COSV6194, Variant assessed as somatic; moderate impact.
- L66V (p.Leu66Val), cosmic curated COSV61943
- L66L (p.Leu66Leu), rs1396948389, gnomAD 11-60463040-G-A, CADD 6.86
- G67E (p.Gly67Glu), cosmic curated COSV10524
- G67R (p.Gly67Arg), cosmic curated COSV61941
Public MS4A1 analysis runs
- MS4A1 analysis run — MS4A1 (703 variants) — completed 2026-08-22