POR (NADPH--cytochrome P450 reductase) variants and mutations
POR (also known as NADPH--cytochrome P450 reductase) is a human protein-coding gene encoding a NADPH--cytochrome P450 reductase protein. It transfers electrons from NADPH to microsomal cytochrome P450 enzymes, making it essential for steroid synthesis and metabolism of many drugs and xenobiotics. Biallelic pathogenic variants cause P450 oxidoreductase deficiency, with disordered steroidogenesis and skeletal abnormalities. This analysis covers 1,007 POR variants and mutations. Of these, 34% have computational variant effect predictions. Disease context includes congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency, Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis, and congenital adrenal hyperplasia. Example POR variants include M1V, M1T, and M1I.
Variant analysis overview
- Gene: POR
- Protein: NADPH--cytochrome P450 reductase
- UniProt accession: P16435
- Organism: Homo sapiens
- Variants analyzed: 1007
- Variant scope: all variants
- Completed: 2026-08-19
Variant and mutation evidence
- Variant composition: 878 unspecified-consequence records; 76 missense variants; 28 synonymous variants; 6 stop-gained variants; 8 frameshift variants; 4 in-frame deletions; 2 splice-region variants; 5 substitution
- Prediction scores: 343 variants have prediction scores (34% of the analyzed set).
Clinical, disease, and population context
- Disease context: 25 disease associations are represented. Top associations: congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency, Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis, congenital adrenal hyperplasia, Antley-Bixler syndrome without genital anomalies or disordered steroidogenesis, coffee consumption, hereditary disease, autoimmune disorder of central nervous system, ovarian neoplasm, substance-related disorder, Fine-Lubinsky syndrome, primary ovarian failure, Abnormality of the skeletal system.
Protein structure and variant hotspots
- Protein features: 1 transmembrane segments; 2 domains; 15 binding sites; 2 post-translational modification sites.
- Structural context: 558 variants have structural context.
- PTM context: 7 variants overlap post-translational modification sites.
Data sources
Evidence in this analysis draws on EBI Proteins Variation, UniProt, gnomAD v4, EuropePMC, 3D Hotspot Analysis, Interaction Network Analysis, Protein Data Bank, AlphaFold DB, gnomAD constraint, Open Targets, ClinGen, MaveDB, LitVar.
Notable POR variants
Examples include M1V, M1T, M1I, G2A, G2R, G2*, G2G, G2V. Listed records include available protein-change notation, database identifiers, clinical classifications, computational predictions, population evidence, experimental measurements, and disease context.
- M1V (p.Met1Val), rs1787568000, gnomAD 7-75954002-A-G, REVEL 0.17, CADD 22.20
- M1T (p.Met1Thr), gnomAD 7-75954003-T-C, REVEL 0.18, CADD 19.20
- M1I (p.Met1Ile), gnomAD 7-75954004-G-T, REVEL 0.15, CADD 22.80
- G2A (p.Gly2Ala), rs782818618, ClinGen CA4303428, ClinVar RCV002895140, ExAC rs782818618, AlphaMissense 0.07, MetaLR 0.06, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- G2R (p.Gly2Arg), gnomAD rs1554553315
- G2* (p.Gly2Ter), gnomAD 7-75954005-G-T, CADD 36.00
- G2G (p.Gly2Gly), rs10262966, gnomAD 7-75954007-A-T, CADD 9.66
- G2V (p.Gly2Val), gnomAD 7-75968086-G-T, CADD 19.00
- G2E (p.Gly2Glu), rs1554555567, gnomAD 7-75968086-G-A, CADD 19.70
- S4L (p.Ser4Leu), rs974390968, gnomAD 7-75968098-C-T, CADD 15.80
- S4* (p.Ser4Ter), gnomAD 7-75968098-C-A, CADD 15.60
- S4S (p.Ser4Ser), rs11979171, gnomAD 7-75968099-G-C, CADD 3.82
- H5Q (p.His5Gln), gnomAD rs1007356570, Likely benign
- H5T (p.His5Thr), gnomAD 7-75954011-TC-T, CADD 23.70
- H5N (p.His5Asn), gnomAD 7-75954014-C-A, REVEL 0.10, CADD 0.96
- H5H (p.His5His), rs1007356570, gnomAD 7-75954016-C-T, CADD 3.72
- V6L (p.Val6Leu), 1000Genomes rs148493509, ESP rs148493509, ExAC rs148493509, TOPMed rs148493509
- V6M (p.Val6Met), 1000Genomes rs148493509, ESP rs148493509, ExAC rs148493509, TOPMed rs148493509
- D7E (p.Asp7Glu), gnomAD rs1554553328
- D7N (p.Asp7Asn), gnomAD rs1554553325
- D7D (p.Asp7Asp), rs1787568591, gnomAD 7-75954010-C-T, CADD 8.75
- T8A (p.Thr8Ala), TOPMed rs1554553329, gnomAD rs1554553329
- T8N (p.Thr8Asn), TOPMed rs1362911934, gnomAD rs1362911934, Uncertain significance, Inborn genetic diseases
- T8K (p.Thr8Lys), rs782514571, gnomAD 7-75968092-C-A, CADD 3.46
- T8M (p.Thr8Met), rs782514571, gnomAD 7-75968092-C-T, CADD 4.49
- S9N (p.Ser9Asn), TOPMed rs1554553330, gnomAD rs1554553330, Uncertain significance, Inborn genetic diseases
- S9R (p.Ser9Arg), TOPMed rs1787569518
- S9F (p.Ser9Phe), gnomAD 7-75954012-C-T, REVEL 0.16, CADD 22.60
- S9L (p.Ser9Leu), rs1788265233, gnomAD 7-75968099-GT-G, CADD 10.40
- S9Y (p.Ser9Tyr), gnomAD 7-75968101-C-A, CADD 13.70
- S10F (p.Ser10Phe), ExAC rs782695041, gnomAD rs782695041
- T11A (p.Thr11Ala), rs1554553329, gnomAD 7-75954023-A-G, REVEL 0.04, CADD 0.03
- T11I (p.Thr11Ile), gnomAD 7-75954024-C-T, REVEL 0.10, CADD 11.30
- T11N (p.Thr11Asn), rs1362911934, gnomAD 7-75954024-C-A, REVEL 0.10, CADD 8.00
- T11T (p.Thr11Thr), gnomAD 7-75954025-C-T, CADD 7.06
- V12L (p.Val12Leu), ESP rs369118442, ExAC rs369118442, TOPMed rs369118442, gnomAD rs369118442, Uncertain significance
- V12M (p.Val12Met), rs369118442, ClinGen CA4303432, cosmic curated COSV67516, ClinVar RCV001932772, AlphaMissense 0.08, MetaLR 0.07, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- S13G (p.Ser13Gly), gnomAD 7-75954026-A-G, REVEL 0.06, CADD 5.20
- S13N (p.Ser13Asn), rs1554553330, gnomAD 7-75954027-G-A, REVEL 0.04, CADD 6.57
- S13F (p.Ser13Phe), rs782695041, gnomAD 7-75954030-C-T, REVEL 0.12, CADD 18.10
- S13S (p.Ser13Ser), rs781799978, gnomAD 7-75954031-C-T, CADD 6.84
- E14* (p.Glu14Ter), rs373053855, ClinGen CA4303437, cosmic curated COSV67517, ClinVar RCV003518265, AlphaMissense 0.11, MetaLR 0.12, Pathogenic
- E14K (p.Glu14Lys), ESP rs373053855, ExAC rs373053855, TOPMed rs373053855, gnomAD rs373053855, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- E14R (p.Glu14Arg), gnomAD 7-75968107-CT-C, CADD 3.33
- E11del (p.Glu11del), gnomAD 7-75968108-TGAG-T, CADD 14.10
- E14Q (p.Glu14Gln), rs1788265739, gnomAD 7-75968109-G-C, CADD 14.80
- E14D (p.Glu14Asp), rs1554555576, gnomAD 7-75968114-G-T, CADD 8.88
- A15V (p.Ala15Val), rs782214390, ClinGen CA4303440, ClinVar RCV002570994, ClinVar RCV005398935, AlphaMissense 0.08, MetaLR 0.11, Uncertain significance, Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis; An
- A15T (p.Ala15Thr), rs575188308, gnomAD 7-75968118-G-A, CADD 0.01
- A15S (p.Ala15Ser), rs575188308, gnomAD 7-75968118-G-T, CADD 0.01
- A15G (p.Ala15Gly), rs782305769, gnomAD 7-75968119-C-G, CADD 4.55
- V16M (p.Val16Met), cosmic curated COSV10582, gnomAD rs1554553342
- V16V (p.Val16Val), rs781862803, gnomAD 7-75954037-G-A, CADD 2.45
- A17V (p.Ala17Val), rs782214390, gnomAD 7-75954045-C-T, REVEL 0.02, AlphaMissense 0.08
- A17E (p.Ala17Glu), gnomAD 7-75954045-C-A, REVEL 0.03, CADD 10.20
- A17A (p.Ala17Ala), rs782378313, gnomAD 7-75954046-G-A, CADD 0.47
- E18* (p.Glu18Ter), TOPMed rs1210260354, gnomAD rs1210260354
- E18K (p.Glu18Lys), TOPMed rs1210260354, gnomAD rs1210260354
- E18Q (p.Glu18Gln), TOPMed rs1210260354, gnomAD rs1210260354
- E18E (p.Glu18Glu), rs782620680, gnomAD 7-75954043-G-A, CADD 5.35
- E19K (p.Glu19Lys), rs1210260354, gnomAD 7-75954053-G-A, REVEL 0.16, CADD 19.20
- E19* (p.Glu19Ter), rs1210260354, gnomAD 7-75954053-G-T, CADD 35.00
- E19E (p.Glu19Glu), rs920539251, gnomAD 7-75954055-A-G, CADD 7.94
- V20M (p.Val20Met), rs1554553342, gnomAD 7-75954047-G-A, REVEL 0.04, CADD 9.47
- S21P (p.Ser21Pro), TOPMed rs1230396839, gnomAD rs1230396839
- L22F (p.Leu22Phe), rs782318066, ClinGen CA4303445, ClinVar RCV003130328, ClinVar RCV005467930, AlphaMissense 0.06, MetaLR 0.07, Uncertain significance, not provided; Inborn genetic diseases
- L22M (p.Leu22Met), gnomAD 7-75968121-C-A, CADD 5.98
- L22L (p.Leu22Leu), gnomAD 7-75968121-C-T, CADD 6.72
- L22V (p.Leu22Val), rs1788483332, gnomAD 7-75972419-C-G, CADD 1.40
- F23S (p.Phe23Ser), gnomAD rs1554553353
- F23Y (p.Phe23Tyr), gnomAD rs1554553353
- F23L (p.Phe23Leu), gnomAD 7-75954068-T-C, REVEL 0.21, CADD 15.80
- F23F (p.Phe23Phe), rs1282792885, gnomAD 7-75954070-C-T, CADD 8.82
- S24Y (p.Ser24Tyr), gnomAD 7-75954058-A-AGT, CADD 23.10
- S24P (p.Ser24Pro), rs1230396839, gnomAD 7-75954062-T-C, REVEL 0.29, CADD 17.40
- S24G (p.Ser24Gly), gnomAD 7-75954071-A-G, REVEL 0.11, CADD 17.50
- M25V (p.Met25Val), cosmic curated COSV10120, TOPMed rs1434396661
- T26A (p.Thr26Ala), TOPMed rs1333374911, gnomAD rs1333374911
- T26S (p.Thr26Ser), TOPMed rs1333374911, gnomAD rs1333374911
- T26M (p.Thr26Met), rs781915397, ClinGen CA4303446, ClinVar RCV002629206, ExAC rs781915397, REVEL 0.03, CADD 6.08, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- T26K (p.Thr26Lys), gnomAD 7-75954078-C-A, REVEL 0.06, CADD 7.41
- T26T (p.Thr26Thr), rs41295381, gnomAD 7-75954079-G-A, CADD 0.22
- D27N (p.Asp27Asn), Ensembl rs2116420434
- D27H (p.Asp27His), gnomAD 7-75954080-G-C, REVEL 0.29, CADD 24.70
- M28L (p.Met28Leu), ExAC rs782721917, TOPMed rs782721917, gnomAD rs782721917
- M28V (p.Met28Val), gnomAD 7-75954083-A-G, REVEL 0.05, CADD 0.02
- M28T (p.Met28Thr), gnomAD 7-75954084-T-C, REVEL 0.06, CADD 13.80
- M28I (p.Met28Ile), gnomAD 7-75954085-G-A, REVEL 0.04, CADD 5.44
- I29F (p.Ile29Phe), rs1554553312, gnomAD 7-75953996-A-T, REVEL 0.03, CADD 14.20
- I29I (p.Ile29Ile), gnomAD 7-75953998-C-A, CADD 6.27
- F31L (p.Phe31Leu), ESP rs370315473, TOPMed rs370315473, gnomAD rs370315473
- S32A (p.Ser32Ala), TOPMed rs1171522877, gnomAD rs1171522877
- S32L (p.Ser32Leu), rs374350596, cosmic curated COSV67517, 1000Genomes rs374350596, ESP rs374350596, REVEL 0.22, CADD 19.10, Variant assessed as somatic; moderate impact.
- S32S (p.Ser32Ser), rs1554553365, gnomAD 7-75954097-G-A, CADD 0.73
- L33F (p.Leu33Phe), Ensembl rs1585105506
- L33P (p.Leu33Pro), Ensembl rs2116420606
- I34M (p.Ile34Met), ExAC rs371758475, TOPMed rs371758475, gnomAD rs371758475, Uncertain significance, Inborn genetic diseases
- I34V (p.Ile34Val), gnomAD 7-75954086-A-G, REVEL 0.07, CADD 1.29
- I34I (p.Ile34Ile), rs781863684, gnomAD 7-75954088-T-C, CADD 8.61
- V35A (p.Val35Ala), TOPMed rs1787574395
- V35M (p.Val35Met), rs782469484, ClinGen CA4303453, ClinVar RCV001160442, ClinVar RCV002557369, AlphaMissense 0.14, MetaLR 0.14, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- V35V (p.Val35Val), gnomAD 7-75954106-G-A, CADD 8.04
- G36D (p.Gly36Asp), TOPMed rs1199443326, gnomAD rs1199443326
- G36V (p.Gly36Val), TOPMed rs1199443326, gnomAD rs1199443326
- G36G (p.Gly36Gly), gnomAD 7-75954109-T-A, CADD 2.77
- G36* (p.Gly36Ter), gnomAD 7-75972443-G-T, CADD 12.70
- G36R (p.Gly36Arg), rs782076318, gnomAD 7-75972461-G-A, CADD 24.00
- G36W (p.Gly36Trp), gnomAD 7-75972461-G-T, CADD 23.60
- L37L (p.Leu37Leu), gnomAD 7-75954100-C-A, CADD 6.67
- L38L (p.Leu38Leu), gnomAD 7-75954112-C-G, CADD 4.56
- T39A (p.Thr39Ala), rs1787574873, ClinGen CA367738364, ClinVar RCV001810607, Ensembl rs1787574873, AlphaMissense 0.10, MetaLR 0.09, Uncertain significance, not provided
- T39P (p.Thr39Pro), gnomAD 7-75954114-TA-T, CADD 13.30
- T39S (p.Thr39Ser), gnomAD 7-75954117-C-G, REVEL 0.07, CADD 15.60
- T39T (p.Thr39Thr), rs781845734, gnomAD 7-75954118-C-T, CADD 10.80
- Y40D (p.Tyr40Asp), 1000Genomes rs557738416, ExAC rs557738416, gnomAD rs557738416
- Y40H (p.Tyr40His), gnomAD 7-75968094-T-C, CADD 15.60
- Y40C (p.Tyr40Cys), gnomAD 7-75968095-A-G, CADD 16.60
- Y40Y (p.Tyr40Tyr), rs1563422342, gnomAD 7-75968096-C-T, CADD 13.40
- W41C (p.Trp41Cys), cosmic curated COSV10533, TOPMed rs1210348345, gnomAD rs1210348345
- W41G (p.Trp41Gly), rs1554553372, gnomAD 7-75954121-CT-C, CADD 25.50
- L43F (p.Leu43Phe), rs2535263495, ClinGen CA367738494, ClinVar RCV003037029, Uncertain significance, not provided
- L43L (p.Leu43Leu), rs1446220981, gnomAD 7-75954113-C-T, CADD 5.45
- L43P (p.Leu43Pro), gnomAD 7-75954129-T-C, REVEL 0.12, CADD 24.70
- F44I (p.Phe44Ile), gnomAD 7-75954125-T-A, REVEL 0.16, CADD 23.20
- R45K (p.Arg45Lys), ExAC rs782652658
- R45I (p.Arg45Ile), gnomAD 7-75968125-G-T, CADD 16.40
- R45M (p.Arg45Met), gnomAD 7-75968128-G-T, CADD 23.70
- R45W (p.Arg45Trp), rs1554555627, gnomAD 7-75968254-C-T, CADD 0.07
- R45G (p.Arg45Gly), rs1554555627, gnomAD 7-75968254-C-G, CADD 0.08
- R45R (p.Arg45Arg), rs1554555627, gnomAD 7-75968254-C-A, CADD 0.05
- R45Q (p.Arg45Gln), rs1025967984, gnomAD 7-75968255-G-A, CADD 0.03
- R45L (p.Arg45Leu), gnomAD 7-75968255-G-T, CADD 0.02
- K46E (p.Lys46Glu), gnomAD rs949835719
- K46N (p.Lys46Asn), rs56355228, ClinGen CA4303460, ClinVar RCV002647218, ClinVar RCV003988063, AlphaMissense 0.48, MetaLR 0.15, Uncertain significance, not specified; Congenital adrenal hyperplasia due to cytochrome P450 oxidoreduct
- K46R (p.Lys46Arg), rs782289780, ClinGen CA4303458, ClinVar RCV001974892, ExAC rs782289780, AlphaMissense 0.09, MetaLR 0.10, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- K46* (p.Lys46Ter), rs1788275191, gnomAD 7-75968275-A-T, CADD 5.84
- K46K (p.Lys46Lys), rs1554555637, gnomAD 7-75968277-G-A, CADD 12.50
- K47R (p.Lys47Arg), gnomAD rs1554553387
- K48E (p.Lys48Glu), rs1347157369, ClinGen CA367738617, NCI-TCGA Cosmic COSV1012, cosmic curated COSV10120, REVEL 0.11, CADD 24.20, Uncertain significance, Inborn genetic diseases
- K48R (p.Lys48Arg), rs782289780, gnomAD 7-75954138-A-G, REVEL 0.09, AlphaMissense 0.09
- K51del (p.Lys51del), gnomAD 7-75954139-GAAA-G, CADD 19.60
- K48N (p.Lys48Asn), rs56355228, gnomAD 7-75954139-G-C, REVEL 0.10, AlphaMissense 0.48
- K48Q (p.Lys48Gln), gnomAD 7-75954143-A-C, REVEL 0.06, CADD 22.50
- E50D (p.Glu50Asp), rs370701548, ClinGen CA4303463, ClinVar RCV000351730, ClinVar RCV006362308, AlphaMissense 0.08, MetaLR 0.11, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- E50V (p.Glu50Val), rs376145249, ClinGen CA4303462, ClinVar RCV000313286, ClinVar RCV005462955, AlphaMissense 0.11, MetaLR 0.32, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- V51F (p.Val51Phe), ExAC rs781950100, gnomAD rs781950100
- V51I (p.Val51Ile), ExAC rs781950100, gnomAD rs781950100
- P52L (p.Pro52Leu), ExAC rs72553988, TOPMed rs72553988, gnomAD rs72553988
- P52S (p.Pro52Ser), TOPMed rs1787577035
- P52P (p.Pro52Pro), rs782368623, gnomAD 7-75954157-C-G, CADD 0.28
- P52Q (p.Pro52Gln), gnomAD 7-75968104-C-A, CADD 4.40
- P52A (p.Pro52Ala), gnomAD 7-75968106-C-G, CADD 4.11
- P52H (p.Pro52His), gnomAD 7-75968261-C-A, CADD 1.74
- P52R (p.Pro52Arg), rs1554555631, gnomAD 7-75968261-C-G, CADD 1.88
- E53D (p.Glu53Asp), cosmic curated COSV10823, gnomAD rs781868923, REVEL 0.02, AlphaMissense 0.08
- E53Q (p.Glu53Gln), ExAC rs782151568, gnomAD rs782151568, Uncertain significance
- E53K (p.Glu53Lys), rs782151568, ClinGen CA4303468, NCI-TCGA Cosmic COSV6751, cosmic curated COSV67518, REVEL 0.19, CADD 22.50, Uncertain significance
- E53del (p.Glu53del), rs72553987, gnomAD 7-75954143-AAAG-A, CADD 21.30
- E53E (p.Glu53Glu), gnomAD 7-75954148-A-G, CADD 5.82
- E53V (p.Glu53Val), rs376145249, gnomAD 7-75954150-A-T, REVEL 0.05, AlphaMissense 0.11
- F54L (p.Phe54Leu), rs927062544, ClinGen CA160922701, ClinVar RCV001812591, ClinVar RCV002542353, AlphaMissense 0.83, MetaLR 0.22, Uncertain significance, Inborn genetic diseases; not provided; Congenital adrenal hyperplasia due to cyt
- F54V (p.Phe54Val), gnomAD 7-75954161-T-G, REVEL 0.12, CADD 22.40
- T55A (p.Thr55Ala), rs781793249, ClinGen CA4303470, ClinVar RCV002046537, ExAC rs781793249, AlphaMissense 0.08, MetaLR 0.09, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- T55I (p.Thr55Ile), TOPMed rs1412292909
- K56R (p.Lys56Arg), gnomAD rs1787579755
- K56E (p.Lys56Glu), gnomAD 7-75954167-A-G, REVEL 0.09, CADD 23.10
- I57V (p.Ile57Val), 1000Genomes rs566582879, ExAC rs566582879, gnomAD rs566582879
- I57F (p.Ile57Phe), gnomAD 7-75954164-AC-A, CADD 25.40
- Q58E (p.Gln58Glu), gnomAD 7-75954173-C-G, REVEL 0.06, CADD 12.30
- Q58Q (p.Gln58Gln), gnomAD 7-75954175-G-A, CADD 2.22
- Q58* (p.Gln58Ter), rs934284308, gnomAD 7-75972425-C-T, CADD 10.00
- T59R (p.Thr59Arg), TOPMed rs1403638902, gnomAD rs1403638902
- T59A (p.Thr59Ala), rs781793249, gnomAD 7-75954164-A-G, REVEL 0.06, AlphaMissense 0.08
- T59T (p.Thr59Thr), gnomAD 7-75954166-C-A, CADD 12.30
- T61A (p.Thr61Ala), Ensembl rs1788482888
- T61I (p.Thr61Ile), rs868909994, ClinGen CA367747106, ClinVar RCV001919053, ClinVar RCV005465599, AlphaMissense 0.18, MetaLR 0.05, Uncertain significance, Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency
- T61K (p.Thr61Lys), gnomAD 7-75954177-C-A, REVEL 0.06, CADD 15.80
- T61R (p.Thr61Arg), rs1403638902, gnomAD 7-75954177-C-G, REVEL 0.06, CADD 18.90
- T61T (p.Thr61Thr), gnomAD 7-75954178-A-G, CADD 9.87
- S62F (p.Ser62Phe), Ensembl rs1781508627
Public POR analysis runs
- POR analysis run — POR (1,007 variants) — completed 2026-08-19