CRMP1 (Q14194) variants and mutations
CRMP1 (also known as Q14194) is a human protein-coding gene encoding a dihydropyrimidinase-related protein 1 protein. It helps translate semaphorin guidance signals into changes in the neuronal cytoskeleton, directing axon growth and growth-cone responses. Its effects on actin organization and cell migration contribute to the formation and remodeling of neuronal connections. This analysis covers 398 CRMP1 variants and mutations. Of these, 94% have computational variant effect predictions. Disease context includes neurodegenerative disease, alcohol drinking, and stroke disorder. Example CRMP1 variants include D15N, R16*, and R16P.
Variant analysis overview
- Gene: CRMP1
- Protein: Q14194
- UniProt accession: Q14194
- Organism: Homo sapiens
- Variants analyzed: 398
- Variant scope: all variants
- Completed: 2026-10-14
Variant and mutation evidence
- Variant composition: 345 unspecified-consequence records; 1 stop lost; 1 stop retained variant; 57 missense variants; 22 synonymous variants; 1 splice-region variants
- Prediction scores: 376 variants have prediction scores (94% of the analyzed set).
Clinical, disease, and population context
- Disease context: 25 disease associations are represented. Top associations: neurodegenerative disease, alcohol drinking, stroke disorder, neurodevelopmental disorder, acute tonsillitis, pituitary gland disorder, Intellectual disability, placental retention, COVID-19, severe acute respiratory syndrome, musculoskeletal system disorder, shoulder fracture.
Protein structure and variant hotspots
- Protein features: 11 post-translational modification sites.
- PTM context: 8 variants overlap post-translational modification sites.
Data sources
Evidence in this analysis draws on EBI Proteins Variation, UniProt, gnomAD v4, EuropePMC, 3D Hotspot Analysis, Interaction Network Analysis, Protein Data Bank, AlphaFold DB, gnomAD constraint, Open Targets, MaveDB, LitVar.
Notable CRMP1 variants
Examples include D15N, R16*, R16P, G21T, R23W, I24T, I25V, D27N. Listed records include available protein-change notation, database identifiers, clinical classifications, computational predictions, population evidence, experimental measurements, and disease context.
- D15N (p.Asp15Asn), cosmic curated COSV61480, ESM-1b 0.46, AlphaMissense 0.16
- R16* (p.Arg16Ter), rs769736612, cosmic curated COSV10587, ExAC rs769736612, TOPMed rs769736612, Variant assessed as somatic; high impact.
- R16P (p.Arg16Pro), NCI-TCGA Cosmic COSV6148, cosmic curated COSV61481, ESM-1b 1.00, AlphaMissense 0.83, Variant assessed as somatic; moderate impact.
- G21T (p.Gly21Thr), NCI-TCGA TCGA novel, ESM-1b 1.00, AlphaMissense 0.76, Variant assessed as somatic; moderate impact.
- R23W (p.Arg23Trp), cosmic curated COSV61483, ExAC rs745621595, TOPMed rs745621595, gnomAD rs745621595, ESM-1b 1.00, AlphaMissense 0.34
- I24T (p.Ile24Thr), cosmic curated COSV61482, ESM-1b 1.00, AlphaMissense 0.93
- I25V (p.Ile25Val), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, ESM-1b 0.00, AlphaMissense 0.09, Variant assessed as somatic; moderate impact.
- D27N (p.Asp27Asn), cosmic curated COSV10027, ExAC rs545458583, TOPMed rs545458583, gnomAD rs545458583, ESM-1b 1.00, AlphaMissense 0.36, Uncertain significance
- D27Y (p.Asp27Tyr), rs545458583, ClinGen CA2837425, cosmic curated COSV10027, ClinVar RCV004100795, ESM-1b 1.00, AlphaMissense 0.68, Uncertain significance, not specified
- Q29H (p.Gln29His), rs777215799, NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, 1000Genomes rs777215799, ESM-1b 0.88, AlphaMissense 0.17, Variant assessed as somatic; moderate impact.
- S30F (p.Ser30Phe), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61479, ESM-1b 1.00, AlphaMissense 0.73, Variant assessed as somatic; moderate impact.
- S30T (p.Ser30Thr), cosmic curated COSV61480, ESM-1b 1.00, AlphaMissense 0.16
- Y32F (p.Tyr32Phe), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.08, Variant assessed as somatic; moderate impact.
- E38K (p.Glu38Lys), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.85, Variant assessed as somatic; moderate impact.
- K43N (p.Lys43Asn), cosmic curated COSV10813, ESM-1b 1.00, AlphaMissense 0.95
- G46V (p.Gly46Val), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.96, Variant assessed as somatic; moderate impact.
- E47* (p.Glu47Ter), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61479, Variant assessed as somatic; high impact.
- L49S (p.Leu49Ser), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.98, Variant assessed as somatic; moderate impact.
- V51I (p.Val51Ile), rs758415603, NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, NCI-TCGA Cosmic COSV9906, ESM-1b 0.00, AlphaMissense 0.10, Variant assessed as somatic; moderate impact.
- V51L (p.Val51Leu), cosmic curated COSV99063, ExAC rs758415603, gnomAD rs758415603, ESM-1b 1.00, AlphaMissense 0.53
- P52T (p.Pro52Thr), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.70, Variant assessed as somatic; moderate impact.
- T57A (p.Thr57Ala), cosmic curated COSV61482, ESM-1b 1.00, AlphaMissense 0.13
- E59D (p.Glu59Asp), cosmic curated COSV61478, ESM-1b 0.00, AlphaMissense 0.12
- A60S (p.Ala60Ser), cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.30
- A60V (p.Ala60Val), cosmic curated COSV61481, ESM-1b 1.00, AlphaMissense 0.46, Uncertain significance, not specified
- G62R (p.Gly62Arg), cosmic curated COSV61478, TOPMed rs1352884103, gnomAD rs1352884103, ESM-1b 1.00, AlphaMissense 0.40
- G62W (p.Gly62Trp), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, NCI-TCGA Cosmic COSV6147, ESM-1b 1.00, AlphaMissense 0.71, Variant assessed as somatic; moderate impact.
- R63L (p.Arg63Leu), NCI-TCGA Cosmic COSV6148, cosmic curated COSV61481, ESM-1b 0.51, AlphaMissense 0.19, Variant assessed as somatic; moderate impact.
- R63Q (p.Arg63Gln), rs373508403, cosmic curated COSV61480, NCI-TCGA Cosmic COSV6148, ESP rs373508403, ESM-1b 0.48, AlphaMissense 0.09, Variant assessed as somatic; moderate impact.
- R63W (p.Arg63Trp), rs147608754, ClinGen CA2837395, cosmic curated COSV10027, ClinVar RCV004367426, ESM-1b 1.00, AlphaMissense 0.20, Uncertain significance, not specified
- G68E (p.Gly68Glu), cosmic curated COSV61479, ESM-1b 1.00, AlphaMissense 1.00
- N73K (p.Asn73Lys), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 0.00, AlphaMissense 0.89, Variant assessed as somatic; moderate impact.
- T74M (p.Thr74Met), cosmic curated COSV10520, Ensembl rs1713518956, ESM-1b 1.00, AlphaMissense 0.64
- Q77K (p.Gln77Lys), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 0.14, Variant assessed as somatic; moderate impact.
- G82R (p.Gly82Arg), cosmic curated COSV61483, Ensembl rs62297733, ESM-1b 1.00, AlphaMissense 0.35
- T84A (p.Thr84Ala), cosmic curated COSV10027, REVEL 0.24, ESM-1b 0.00
- A85V (p.Ala85Val), cosmic curated COSV61478, ExAC rs201508359, TOPMed rs201508359, gnomAD rs201508359, REVEL 0.18, ESM-1b 1.00, Uncertain significance, not specified
- A86D (p.Ala86Asp), cosmic curated COSV10733, gnomAD rs1271550334, ESM-1b 1.00, AlphaMissense 0.40
- A86T (p.Ala86Thr), cosmic curated COSV61483, ESM-1b 0.93, AlphaMissense 0.08
- D87H (p.Asp87His), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, REVEL 0.31, ESM-1b 1.00, Variant assessed as somatic; moderate impact.
- D88N (p.Asp88Asn), cosmic curated COSV10520, ESM-1b 1.00, AlphaMissense 0.16
- D88Y (p.Asp88Tyr), cosmic curated COSV61481, ESM-1b 1.00, AlphaMissense 0.78
- Q91K (p.Gln91Lys), cosmic curated COSV61478, 1000Genomes rs549636760, ExAC rs549636760, TOPMed rs549636760, ESM-1b 1.00, AlphaMissense 0.13
- G92R (p.Gly92Arg), cosmic curated COSV10520, ESM-1b 1.00, AlphaMissense 1.00
- A95E (p.Ala95Glu), cosmic curated COSV61478, ExAC rs779175259, TOPMed rs779175259, gnomAD rs779175259, REVEL 0.22, ESM-1b 1.00, Uncertain significance
- A95V (p.Ala95Val), rs779175259, NCI-TCGA Cosmic COSV6147, NCI-TCGA Cosmic COSV6148, cosmic curated COSV61483, REVEL 0.25, ESM-1b 1.00, Uncertain significance, CRMP1-related neurodevelopmental disorder
- L97M (p.Leu97Met), cosmic curated COSV61482, ESM-1b 1.00, AlphaMissense 0.26
- L97P (p.Leu97Pro), NCI-TCGA Cosmic COSV6148, cosmic curated COSV61481, ESM-1b 1.00, AlphaMissense 0.99, Variant assessed as somatic; moderate impact.
- L97V (p.Leu97Val), rs766297812, NCI-TCGA Cosmic COSV6148, cosmic curated COSV61481, ESM-1b 1.00, AlphaMissense 0.11, Variant assessed as somatic; moderate impact.
- V98L (p.Val98Leu), NCI-TCGA Cosmic COSV6148, cosmic curated COSV61481, ESM-1b 0.00, AlphaMissense 0.11, Variant assessed as somatic; moderate impact.
- G99S (p.Gly99Ser), cosmic curated COSV10462, NCI-TCGA TCGA novel, ESM-1b 1.00, AlphaMissense 0.70, Variant assessed as somatic; moderate impact.
- G100R (p.Gly100Arg), cosmic curated COSV10462, REVEL 0.11, ESM-1b 1.00
- T101N (p.Thr101Asn), cosmic curated COSV61483, ESM-1b 1.00, AlphaMissense 0.82
- T102M (p.Thr102Met), rs1560508405, NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, gnomAD rs1560508405, ESM-1b 1.00, AlphaMissense 0.80, Variant assessed as somatic; moderate impact.
- M103I (p.Met103Ile), cosmic curated COSV10587, ESM-1b 1.00, AlphaMissense 0.90
- M103T (p.Met103Thr), NCI-TCGA Cosmic COSV6148, cosmic curated COSV61480, ESM-1b 0.81, AlphaMissense 0.16, Variant assessed as somatic; moderate impact.
- P110S (p.Pro110Ser), cosmic curated COSV61482, ESM-1b 1.00, AlphaMissense 0.16
- E111D (p.Glu111Asp), cosmic curated COSV11444, ESM-1b 0.19, AlphaMissense 0.08
- S114C (p.Ser114Cys), rs1390300757, NCI-TCGA Cosmic COSV6148, cosmic curated COSV61481, TOPMed rs1390300757, ESM-1b 0.84, AlphaMissense 0.07, Variant assessed as somatic; moderate impact.
- S115N (p.Ser115Asn), cosmic curated COSV10520, ExAC rs757022185, gnomAD rs757022185, ESM-1b 1.00, AlphaMissense 0.13
- F120L (p.Phe120Leu), cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 0.93
- E121* (p.Glu121Ter), cosmic curated COSV61484
- E121K (p.Glu121Lys), rs773574222, ClinGen CA2837346, cosmic curated COSV10520, ClinVar RCV004367427, ESM-1b 1.00, AlphaMissense 0.23, Uncertain significance, not specified
- K122Q (p.Lys122Gln), cosmic curated COSV61480, ESM-1b 0.40, AlphaMissense 0.08
- K122T (p.Lys122Thr), cosmic curated COSV10587, ESM-1b 1.00, AlphaMissense 0.11
- E125K (p.Glu125Lys), rs376766526, NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, ESP rs376766526, ESM-1b 0.84, AlphaMissense 0.11, Variant assessed as somatic; moderate impact.
- C132T (p.Cys132Thr), rs771581090, ExAC rs771581090, TOPMed rs771581090, gnomAD rs771581090, ESM-1b 1.00, AlphaMissense 0.71, Variant assessed as somatic; moderate impact.
- C133R (p.Cys133Arg), cosmic curated COSV11444, ESM-1b 1.00, AlphaMissense 0.98
- C133T (p.Cys133Thr), rs2475531598, ClinGen CA356155029, NCI-TCGA Cosmic COSV6148, ClinVar RCV004357153, ESM-1b 1.00, AlphaMissense 0.77, Uncertain significance
- L137F (p.Leu137Phe), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.17, Variant assessed as somatic; moderate impact.
- L137I (p.Leu137Ile), cosmic curated COSV11444, ESM-1b 1.00, AlphaMissense 0.25
- H138N (p.His138Asn), cosmic curated COSV10587, ESM-1b 1.00, AlphaMissense 0.74
- H138R (p.His138Arg), cosmic curated COSV11444, ESM-1b 1.00, AlphaMissense 0.96
- H138Y (p.His138Tyr), cosmic curated COSV11444, ESM-1b 1.00, AlphaMissense 0.83
- V139M (p.Val139Met), rs548835481, NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, 1000Genomes rs548835481, ESM-1b 0.00, AlphaMissense 0.12, Variant assessed as somatic; moderate impact.
- D140E (p.Asp140Glu), cosmic curated COSV61482, ESM-1b 1.00, AlphaMissense 0.86
- D146N (p.Asp146Asn), rs777531665, ClinGen CA2837334, NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, ESM-1b 0.63, AlphaMissense 0.10, Uncertain significance, not specified
- V148I (p.Val148Ile), rs1417061818, cosmic curated COSV10610, TOPMed rs1417061818, gnomAD rs1417061818, ESM-1b 0.00, AlphaMissense 0.06, Variant assessed as somatic; moderate impact.
- R149L (p.Arg149Leu), cosmic curated COSV61481, ExAC rs754327324, TOPMed rs754327324, gnomAD rs754327324, ESM-1b 1.00, AlphaMissense 0.17, Uncertain significance, not specified
- R149Q (p.Arg149Gln), cosmic curated COSV61483, ExAC rs754327324, TOPMed rs754327324, gnomAD rs754327324, ESM-1b 0.00, AlphaMissense 0.07
- R149W (p.Arg149Trp), cosmic curated COSV61481, ESP rs373503083, ExAC rs373503083, TOPMed rs373503083, ESM-1b 1.00, AlphaMissense 0.13, Uncertain significance, not specified
- E150K (p.Glu150Lys), rs868118770, NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, Ensembl rs868118770, ESM-1b 0.00, AlphaMissense 0.17, Variant assessed as somatic; moderate impact.
- E151K (p.Glu151Lys), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 0.84, Variant assessed as somatic; moderate impact.
- V154L (p.Val154Leu), cosmic curated COSV61482, ESM-1b 0.00, AlphaMissense 0.09
- V154M (p.Val154Met), cosmic curated COSV61479, TOPMed rs1470586615, ESM-1b 0.00, AlphaMissense 0.08
- L155M (p.Leu155Met), cosmic curated COSV61478, ESM-1b 0.00, AlphaMissense 0.29
- Q157* (p.Gln157Ter), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, Variant assessed as somatic; high impact.
- Q157K (p.Gln157Lys), cosmic curated COSV61478, ESM-1b 0.00, AlphaMissense 0.07
- K159* (p.Lys159Ter), cosmic curated COSV61481
- G160C (p.Gly160Cys), NCI-TCGA Cosmic COSV1002, NCI-TCGA Cosmic COSV6148, cosmic curated COSV61483, ESM-1b 1.00, AlphaMissense 0.70, Variant assessed as somatic; moderate impact.
- G160R (p.Gly160Arg), cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.88
- V161I (p.Val161Ile), cosmic curated COSV10027, 1000Genomes rs200972738, ESP rs200972738, ExAC rs200972738, ESM-1b 0.00, AlphaMissense 0.05, Uncertain significance, not specified
- S163C (p.Ser163Cys), cosmic curated COSV61482, ESM-1b 1.00, AlphaMissense 0.68
- S163F (p.Ser163Phe), NCI-TCGA Cosmic COSV6148, cosmic curated COSV61480, ESM-1b 1.00, AlphaMissense 0.99, Variant assessed as somatic; moderate impact.
- M168I (p.Met168Ile), cosmic curated COSV61479, ESM-1b 1.00, AlphaMissense 0.93
- K171N (p.Lys171Asn), cosmic curated COSV61483, ESM-1b 1.00, AlphaMissense 0.86
- D178N (p.Asp178Asn), cosmic curated COSV61479, ExAC rs764467563, TOPMed rs764467563, gnomAD rs764467563, ESM-1b 0.00, AlphaMissense 0.49
- L181I (p.Leu181Ile), cosmic curated COSV61483, ESM-1b 0.00, AlphaMissense 0.15
- E183D (p.Glu183Asp), cosmic curated COSV61478, ESM-1b 0.49, AlphaMissense 0.20
- L188F (p.Leu188Phe), cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 0.47
- L188R (p.Leu188Arg), cosmic curated COSV61481, ESM-1b 1.00, AlphaMissense 0.97
- K189M (p.Lys189Met), cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 0.59
- G190C (p.Gly190Cys), cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.11
- L191M (p.Leu191Met), cosmic curated COSV61481, ESM-1b 1.00, AlphaMissense 0.10
- G192* (p.Gly192Ter), cosmic curated COSV10462
- G192E (p.Gly192Glu), cosmic curated COSV61480, ESM-1b 1.00, AlphaMissense 0.87
- A193D (p.Ala193Asp), cosmic curated COSV10885, ESM-1b 1.00, AlphaMissense 0.99
- A193S (p.Ala193Ser), cosmic curated COSV10027, ESM-1b 0.00, AlphaMissense 0.20
- V194A (p.Val194Ala), cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 0.41
- L196V (p.Leu196Val), cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.14
- V197A (p.Val197Ala), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61479, ESM-1b 1.00, AlphaMissense 0.71, Variant assessed as somatic; moderate impact.
- H198R (p.His198Arg), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.84, Variant assessed as somatic; moderate impact.
- H198Y (p.His198Tyr), cosmic curated COSV10520, ESM-1b 1.00, AlphaMissense 0.78
- A199V (p.Ala199Val), cosmic curated COSV61481, REVEL 0.37, ESM-1b 1.00, Uncertain significance, not specified
- E200* (p.Glu200Ter), cosmic curated COSV10587
- L204F (p.Leu204Phe), cosmic curated COSV11444, NCI-TCGA Cosmic COSV6148, cosmic curated COSV61482, ESM-1b 1.00, AlphaMissense 0.57, Variant assessed as somatic; moderate impact.
- Q207E (p.Gln207Glu), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, ESM-1b 0.00, AlphaMissense 0.07, Variant assessed as somatic; moderate impact.
- Q207R (p.Gln207Arg), rs1189462087, NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, gnomAD rs1189462087, ESM-1b 1.00, AlphaMissense 0.15, Variant assessed as somatic; moderate impact.
- Q209L (p.Gln209Leu), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61479, ESM-1b 1.00, AlphaMissense 0.68, Variant assessed as somatic; moderate impact.
- R211L (p.Arg211Leu), cosmic curated COSV61479, ExAC rs751597431, TOPMed rs751597431, gnomAD rs751597431, ESM-1b 1.00, AlphaMissense 0.34
- E214K (p.Glu214Lys), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.17, Variant assessed as somatic; moderate impact.
- M215I (p.Met215Ile), rs146352571, ClinGen CA2837217, cosmic curated COSV61480, ClinVar RCV004226016, ESM-1b 1.00, AlphaMissense 0.42, Uncertain significance, not specified
- T218A (p.Thr218Ala), NCI-TCGA TCGA novel, ESM-1b 1.00, AlphaMissense 0.12, Variant assessed as somatic; moderate impact.
- T218M (p.Thr218Met), rs142255876, cosmic curated COSV61479, ESP rs142255876, ExAC rs142255876, ESM-1b 1.00, AlphaMissense 0.12, Uncertain significance, not specified
- G219C (p.Gly219Cys), cosmic curated COSV61482, ESM-1b 1.00, AlphaMissense 0.94
- E221K (p.Glu221Lys), rs1183227411, NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, TOPMed rs1183227411, ESM-1b 1.00, AlphaMissense 0.94, Uncertain significance, not specified
- G222D (p.Gly222Asp), cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 1.00
- L225P (p.Leu225Pro), cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 0.98
- P228H (p.Pro228His), NCI-TCGA Cosmic COSV6148, cosmic curated COSV61481, ESM-1b 1.00, AlphaMissense 0.72, Variant assessed as somatic; moderate impact.
- E229Q (p.Glu229Gln), cosmic curated COSV11444, ESM-1b 1.00, AlphaMissense 0.36
- L231P (p.Leu231Pro), cosmic curated COSV61480, ESM-1b 1.00, AlphaMissense 0.93
- E234K (p.Glu234Lys), cosmic curated COSV10610, ESM-1b 1.00, AlphaMissense 0.97
- R238P (p.Arg238Pro), cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 1.00
- R238Q (p.Arg238Gln), rs755012630, NCI-TCGA Cosmic COSV6147, cosmic curated COSV61479, ESM-1b 1.00, AlphaMissense 0.88, Variant assessed as somatic; moderate impact.
- R238W (p.Arg238Trp), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 0.95, Variant assessed as somatic; moderate impact.
- A239T (p.Ala239Thr), cosmic curated COSV61480, ExAC rs753690772, gnomAD rs753690772, ESM-1b 1.00, AlphaMissense 0.21
- T241N (p.Thr241Asn), cosmic curated COSV61482, ESP rs138991048, ExAC rs138991048, TOPMed rs138991048, ESM-1b 1.00, AlphaMissense 0.38
- I242L (p.Ile242Leu), NCI-TCGA Cosmic COSV6147, cosmic curated COSV61479, ESM-1b 0.66, AlphaMissense 0.12, Variant assessed as somatic; moderate impact.
- I242V (p.Ile242Val), cosmic curated COSV11444, ESM-1b 1.00, AlphaMissense 0.08
- A243T (p.Ala243Thr), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, Ensembl rs2152459939, ESM-1b 1.00, AlphaMissense 0.42, Variant assessed as somatic; moderate impact.
- A243V (p.Ala243Val), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ExAC rs750102720, gnomAD rs750102720, ESM-1b 1.00, AlphaMissense 0.75, Variant assessed as somatic; moderate impact.
- N247Y (p.Asn247Tyr), cosmic curated COSV61480, ESM-1b 1.00, AlphaMissense 0.29
- C248G (p.Cys248Gly), NCI-TCGA TCGA novel, ESM-1b 1.00, AlphaMissense 0.34, Variant assessed as somatic; moderate impact.
- V250M (p.Val250Met), cosmic curated COSV61482, TOPMed rs1711712866, ESM-1b 1.00, AlphaMissense 0.23
- K258R (p.Lys258Arg), NCI-TCGA Cosmic COSV6148, cosmic curated COSV61481, ESM-1b 1.00, AlphaMissense 0.07, Variant assessed as somatic; moderate impact.
- S259R (p.Ser259Arg), cosmic curated COSV10462, ESM-1b 1.00, AlphaMissense 0.68
- D262N (p.Asp262Asn), rs372823825, ClinGen CA2837161, cosmic curated COSV61480, ClinVar RCV004304371, ESM-1b 1.00, AlphaMissense 0.10, Uncertain significance, not specified
- I263N (p.Ile263Asn), cosmic curated COSV10965, ESM-1b 1.00, AlphaMissense 0.21
- I263T (p.Ile263Thr), cosmic curated COSV10965, ESM-1b 0.15, AlphaMissense 0.11
- I263V (p.Ile263Val), cosmic curated COSV61479, ExAC rs749266226, gnomAD rs749266226, ESM-1b 0.00, AlphaMissense 0.06
- A265T (p.Ala265Thr), rs1450790289, NCI-TCGA Cosmic COSV6147, cosmic curated COSV61478, TOPMed rs1450790289, ESM-1b 0.72, AlphaMissense 0.07, Variant assessed as somatic; moderate impact.
- A267V (p.Ala267Val), cosmic curated COSV61480, ESM-1b 1.00, AlphaMissense 0.29
- R268K (p.Arg268Lys), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 0.72, AlphaMissense 0.16, Variant assessed as somatic; moderate impact.
- P272L (p.Pro272Leu), cosmic curated COSV10462, ESM-1b 0.00, AlphaMissense 0.08
- P278L (p.Pro278Leu), cosmic curated COSV61480, ESM-1b 1.00, AlphaMissense 0.42
- P278S (p.Pro278Ser), cosmic curated COSV11444, gnomAD rs930409854, ESM-1b 1.00, AlphaMissense 0.38
- I279V (p.Ile279Val), cosmic curated COSV61481, TOPMed rs983344104, gnomAD rs983344104, ESM-1b 0.00, AlphaMissense 0.07, Uncertain significance
- A281T (p.Ala281Thr), cosmic curated COSV61482, ESM-1b 1.00, AlphaMissense 0.28
- T285N (p.Thr285Asn), cosmic curated COSV61481, ExAC rs768018968, TOPMed rs768018968, gnomAD rs768018968, ESM-1b 1.00, AlphaMissense 0.27
- D286N (p.Asp286Asn), cosmic curated COSV61480, ESP rs376257908, ExAC rs376257908, TOPMed rs376257908, REVEL 0.53, ESM-1b 1.00
- W291* (p.Trp291Ter), cosmic curated COSV10462
- W291L (p.Trp291Leu), cosmic curated COSV61483, ESM-1b 1.00, AlphaMissense 0.78
- S292G (p.Ser292Gly), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.18, Variant assessed as somatic; moderate impact.
- K293R (p.Lys293Arg), cosmic curated COSV61481, ESM-1b 0.91, AlphaMissense 0.10
- A296D (p.Ala296Asp), cosmic curated COSV10813, ESM-1b 1.00, AlphaMissense 0.67
- A296V (p.Ala296Val), cosmic curated COSV11444, ESM-1b 1.00, AlphaMissense 0.21
- A299E (p.Ala299Glu), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.99, Variant assessed as somatic; moderate impact.
- A299T (p.Ala299Thr), NCI-TCGA Cosmic COSV1002, cosmic curated COSV10027, ESM-1b 1.00, AlphaMissense 0.81, Variant assessed as somatic; moderate impact.
- A300T (p.Ala300Thr), cosmic curated COSV61483, ExAC rs746725914, TOPMed rs746725914, gnomAD rs746725914, ESM-1b 1.00, AlphaMissense 0.21
- A300V (p.Ala300Val), cosmic curated COSV10027, Ensembl rs1711550704, ESM-1b 1.00, AlphaMissense 0.35
- V302M (p.Val302Met), rs371645916, cosmic curated COSV61478, ESP rs371645916, ExAC rs371645916, ESM-1b 1.00, AlphaMissense 0.73, Variant assessed as somatic; moderate impact.
- S308N (p.Ser308Asn), cosmic curated COSV61479, ESM-1b 1.00, AlphaMissense 0.21
- P309L (p.Pro309Leu), cosmic curated COSV10965, ESP rs367815553, ExAC rs367815553, TOPMed rs367815553, ESM-1b 1.00, AlphaMissense 0.07
- T313M (p.Thr313Met), cosmic curated COSV10965, TOPMed rs1041659079, gnomAD rs1041659079, ESM-1b 1.00, AlphaMissense 0.23
- P314T (p.Pro314Thr), cosmic curated COSV61483, ESM-1b 1.00, AlphaMissense 0.14
- D315N (p.Asp315Asn), cosmic curated COSV10813, 1000Genomes rs577291213, ExAC rs577291213, TOPMed rs577291213, ESM-1b 1.00, AlphaMissense 0.09
- L320I (p.Leu320Ile), cosmic curated COSV10027, ExAC rs771881348, TOPMed rs771881348, gnomAD rs771881348, ESM-1b 1.00, AlphaMissense 0.27
- C323R (p.Cys323Arg), cosmic curated COSV10813, gnomAD rs1436361640, ESM-1b 1.00, AlphaMissense 0.56
- G324E (p.Gly324Glu), cosmic curated COSV10965, ESM-1b 1.00, AlphaMissense 0.49
- G324V (p.Gly324Val), cosmic curated COSV61478, ESM-1b 1.00, AlphaMissense 0.89
Public CRMP1 analysis runs
- CRMP1 analysis run — CRMP1 (398 variants) — completed 2026-10-14