WAS (P42768) variants and mutations
WAS (also known as P42768) is a human protein-coding gene encoding an actin nucleation-promoting factor protein. It couples signaling from immune receptors to actin-cytoskeleton remodeling, enabling immune synapse formation, cell migration, and normal platelet production. Loss-of-function variants cause Wiskott-Aldrich syndrome or X-linked thrombocytopenia, while activating variants can cause severe congenital neutropenia. This analysis covers 788 WAS variants and mutations. Of these, 76% have computational variant effect predictions. Disease context includes Wiskott-Aldrich syndrome, thrombocytopenia 1, and X-linked severe congenital neutropenia. Example WAS variants include M1L, S2T, and S2S.
Variant analysis overview
- Gene: WAS
- Protein: P42768
- UniProt accession: P42768
- Organism: Homo sapiens
- Variants analyzed: 788
- Variant scope: all variants
- Completed: 2026-08-19
Variant and mutation evidence
- Variant composition: 532 unspecified-consequence records; 102 synonymous variants; 125 missense variants; 11 stop-gained variants; 4 splice-region variants; 2 frameshift variants; 1 in-frame deletions; 11 substitution
- Prediction scores: 596 variants have prediction scores (76% of the analyzed set).
Clinical, disease, and population context
- Disease context: 25 disease associations are represented. Top associations: Wiskott-Aldrich syndrome, thrombocytopenia 1, X-linked severe congenital neutropenia, X-linked thrombocytopenia with normal platelets, Thrombocytopenia, hereditary thrombocytopenia with normal platelets, lymphoma, severe congenital neutropenia, hereditary disease, melanoma, skin basal cell carcinoma, endometrial endometrioid adenocarcinoma.
Protein structure and variant hotspots
- Protein features: 3 domains; 4 post-translational modification sites.
- Structural context: 311 variants have structural context.
- PTM context: 3 variants overlap post-translational modification sites.
Data sources
Evidence in this analysis draws on EBI Proteins Variation, UniProt, gnomAD v4, EuropePMC, 3D Hotspot Analysis, Interaction Network Analysis, Protein Data Bank, AlphaFold DB, gnomAD constraint, Open Targets, ClinGen, MaveDB, LitVar.
Notable WAS variants
Examples include M1L, S2T, S2S, S2R, G3R, G3A, G3G, G4C. Listed records include available protein-change notation, database identifiers, clinical classifications, computational predictions, population evidence, experimental measurements, and disease context.
- M1L (p.Met1Leu), rs587776742, ClinGen CA341008, ClinVar RCV000011869, MetaLR 0.94, MetaSVM 0.97, Pathogenic, Wiskott-Aldrich syndrome
- S2T (p.Ser2Thr), TOPMed rs1216332519, gnomAD rs1216332519, REVEL 0.47, CADD 22.60
- S2S (p.Ser2Ser), rs1337984696, gnomAD X-48683859-T-C, CADD 11.80
- S2R (p.Ser2Arg), gnomAD X-48683859-T-A, REVEL 0.52, CADD 22.10
- G3R (p.Gly3Arg), TOPMed rs2062410203
- G3A (p.Gly3Ala), gnomAD X-48683861-G-C, REVEL 0.53, CADD 22.60
- G3G (p.Gly3Gly), rs782383513, gnomAD X-48683862-G-A, CADD 9.99
- G4C (p.Gly4Cys), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- G4G (p.Gly4Gly), rs2062410270, gnomAD X-48683865-C-A, CADD 8.13
- P5L (p.Pro5Leu), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- M6I (p.Met6Ile), Ensembl rs868992548
- M6N (p.Met6Asn), NCI-TCGA TCGA novel, Variant assessed as somatic; high impact.
- M6V (p.Met6Val), rs782730988, ClinGen CA10403829, ClinVar RCV002248938, ClinVar RCV003774705, REVEL 0.44, CADD 1.89, Conflicting interpretations, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- M6K (p.Met6Lys), gnomAD X-48683870-T-A, REVEL 0.46, CADD 1.05
- M6T (p.Met6Thr), gnomAD X-48683870-T-C, REVEL 0.47, CADD 0.75
- G7* (p.Gly7Ter), rs1064793974, ClinGen CA16621415, ClinVar RCV000479329, ClinVar RCV005899645, Pathogenic
- G7A (p.Gly7Ala), TOPMed rs1270182063, gnomAD rs1270182063
- p.Gly7delinsAspTer, gnomAD X-48683872-G-GATT, CADD 25.60
- G7G (p.Gly7Gly), gnomAD X-48683874-A-T, CADD 10.60
- R9K (p.Arg9Lys), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- P10S (p.Pro10Ser), rs2519277370, ClinGen CA412865227, ClinVar RCV003789913, REVEL 0.42, CADD 5.94, Uncertain significance, Wiskott-Aldrich syndrome; X-linked severe congenital neutropenia; Thrombocytopen
- P10P (p.Pro10Pro), rs144372473, gnomAD X-48683883-C-T, CADD 2.19
- G11R (p.Gly11Arg), gnomAD rs1557006217, REVEL 0.46, CADD 15.10
- G11W (p.Gly11Trp), gnomAD X-48683884-G-T, REVEL 0.49, CADD 23.40
- G11A (p.Gly11Ala), gnomAD X-48683885-G-C, REVEL 0.51, CADD 12.60
- G12A (p.Gly12Ala), 1000Genomes rs781942437, ExAC rs781942437, TOPMed rs781942437, gnomAD rs781942437, REVEL 0.41, CADD 13.50, Benign, Wiskott-Aldrich syndrome; X-linked severe congenital neutropenia; Thrombocytopen
- G12D (p.Gly12Asp), gnomAD X-48683888-G-A, REVEL 0.43, CADD 15.00
- R13* (p.Arg13Ter), rs193922415, ClinGen CA342897, ClinVar RCV000030595, ClinVar RCV001230612, Pathogenic
- R13Q (p.Arg13Gln), rs1440423616, ClinGen CA412865286, NCI-TCGA Cosmic COSV6499, ClinVar RCV003438236, REVEL 0.44, CADD 20.80, Conflicting interpretations, not provided; Thrombocytopenia 1; Wiskott-Aldrich syndrome
- R13G (p.Arg13Gly), gnomAD X-48683890-C-G, REVEL 0.47, CADD 18.70
- R13R (p.Arg13Arg), rs2062410511, gnomAD X-48683892-A-C, CADD 1.76
- G14E (p.Gly14Glu), ExAC rs782106008, gnomAD rs782106008, REVEL 0.43, CADD 15.40
- G14R (p.Gly14Arg), rs797044476, ClinGen CA162669, ClinVar RCV000122263, ClinVar RCV001854677, REVEL 0.39, CADD 14.10, Uncertain significance, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- P16A (p.Pro16Ala), rs2519277458, ClinGen CA412865344, ClinVar RCV002705762, Uncertain significance, X-linked severe congenital neutropenia; Thrombocytopenia 1; Wiskott-Aldrich synd
- P16S (p.Pro16Ser), gnomAD X-48683899-C-T, REVEL 0.39, CADD 1.05
- P16L (p.Pro16Leu), gnomAD X-48683900-C-T, REVEL 0.38, CADD 11.00
- A17S (p.Ala17Ser), rs1569493673, ClinGen CA412865373, ClinVar RCV000686435, Ensembl rs1569493673, REVEL 0.32, CADD 3.66, Uncertain significance, Wiskott-Aldrich syndrome; X-linked severe congenital neutropenia; Thrombocytopen
- A17V (p.Ala17Val), rs782380914, ClinGen CA10403834, ClinVar RCV003781970, ExAC rs782380914, REVEL 0.26, CADD 1.58, Likely benign, Wiskott-Aldrich syndrome; X-linked severe congenital neutropenia; Thrombocytopen
- A17A (p.Ala17Ala), rs2062410609, gnomAD X-48683904-G-A, CADD 1.56
- V18I (p.Val18Ile), rs1569493676, ClinGen CA412865387, ClinVar RCV001996908, Ensembl rs1569493676, AlphaMissense 0.08, MetaLR 0.89, Uncertain significance, Thrombocytopenia 1; X-linked severe congenital neutropenia; Wiskott-Aldrich synd
- V18V (p.Val18Val), gnomAD X-48683907-T-G, CADD 5.25
- Q19* (p.Gln19Ter), NCI-TCGA Cosmic COSV6499, Variant assessed as somatic; high impact.
- Q19P (p.Gln19Pro), ESP rs370235898, ExAC rs370235898, TOPMed rs370235898, gnomAD rs370235898, REVEL 0.44, CADD 24.30
- Q19Q (p.Gln19Gln), gnomAD X-48683910-G-A, CADD 6.35
- Q19H (p.Gln19His), gnomAD X-48683910-G-C, REVEL 0.38, CADD 21.40
- Q20* (p.Gln20Ter), rs797044477, ClinGen CA412865428, ClinVar RCV003064718, AlphaMissense 0.08, MetaLR 0.90, Pathogenic
- Q20E (p.Gln20Glu), rs797044477, ClinGen CA162672, ClinVar RCV000122264, Ensembl rs797044477, AlphaMissense 0.08, MetaLR 0.90, not provided, not specified
- Q20H (p.Gln20His), NCI-TCGA Cosmic COSV6499, Variant assessed as somatic; moderate impact.
- N21I (p.Asn21Ile), rs2519277529, ClinGen CA412865463, ClinVar RCV003808494, Uncertain significance, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- I22V (p.Ile22Val), gnomAD rs1557006230, REVEL 0.33, CADD 10.50
- I22T (p.Ile22Thr), gnomAD X-48683918-T-C, REVEL 0.44, CADD 17.40
- P23R (p.Pro23Arg), rs1464176187, ClinGen CA412865520, ClinVar RCV001706848, ClinVar RCV002539714, REVEL 0.50, CADD 17.30, Uncertain significance, Thrombocytopenia 1; X-linked severe congenital neutropenia; Wiskott-Aldrich synd
- P23P (p.Pro23Pro), rs1557006235, gnomAD X-48683922-C-T, CADD 6.18
- S24P (p.Ser24Pro), rs2062410722, ClinGen CA412865528, ClinVar RCV001035433, Ensembl rs2062410722, AlphaMissense 0.91, MetaLR 0.98, Pathogenic, X-linked severe congenital neutropenia; Thrombocytopenia 1; Wiskott-Aldrich synd
- T25I (p.Thr25Ile), rs374574436, ClinGen CA10403836, ClinVar RCV001902911, ESP rs374574436, AlphaMissense 0.09, MetaLR 0.90, Uncertain significance, X-linked severe congenital neutropenia; Thrombocytopenia 1; Wiskott-Aldrich synd
- L26I (p.Leu26Ile), rs2519277595, ClinGen CA412865575, ClinVar RCV004477871, NCI-TCGA TCGA novel, Uncertain significance, Inborn genetic diseases
- L26L (p.Leu26Leu), gnomAD X-48683931-C-T, CADD 3.95
- L27F (p.Leu27Phe), UniProt VAR 005823, Pathogenic, in THC1
- Q28* (p.Gln28Ter), rs2519277606, ClinGen CA412865612, ClinVar RCV003807543, Pathogenic
- D29D (p.Asp29Asp), gnomAD X-48683940-C-T, CADD 11.30
- H30R (p.His30Arg), ExAC rs782794812, gnomAD rs782794812, REVEL 0.52, CADD 20.40
- H30H (p.His30His), rs148800063, gnomAD X-48683943-C-T, CADD 4.13
- E31K (p.Glu31Lys), rs1557006239, ClinGen CA412865672, ClinVar RCV000633307, ClinVar RCV000657918, AlphaMissense 0.67, MetaLR 0.98, Pathogenic/Likely pathogenic, not provided; X-linked severe congenital neutropenia; Thrombocytopenia 1
- E31E (p.Glu31Glu), gnomAD X-48683946-G-A, CADD 12.40
- N32K (p.Asn32Lys), Ensembl rs1602176327, Uncertain significance, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- Q33E (p.Gln33Glu), rs1569493682, ClinGen CA412865716, ClinVar RCV000686843, Ensembl rs1569493682, REVEL 0.45, CADD 15.70, Uncertain significance, Wiskott-Aldrich syndrome; X-linked severe congenital neutropenia; Thrombocytopen
- Q33R (p.Gln33Arg), NCI-TCGA Cosmic COSV6499, Variant assessed as somatic; moderate impact.
- R34* (p.Arg34Ter), rs132630271, ClinGen CA341005, ClinVar RCV000011868, ClinVar RCV003764558, Pathogenic
- R34Q (p.Arg34Gln), rs368523950, NCI-TCGA Cosmic COSV6499, ESP rs368523950, ExAC rs368523950, REVEL 0.39, CADD 21.70, Variant assessed as somatic; moderate impact.
- R34R (p.Arg34Arg), rs132630271, gnomAD X-48683953-C-A, CADD 13.40
- L35P (p.Leu35Pro), rs2519277671, ClinGen CA412865777, ClinVar RCV003219202, Likely pathogenic, Wiskott-Aldrich syndrome
- F36Y (p.Phe36Tyr), NCI-TCGA Cosmic COSV6499, Variant assessed as somatic; moderate impact.
- F36L (p.Phe36Leu), gnomAD X-48683961-T-G, REVEL 0.56, CADD 11.30
- E37Q (p.Glu37Gln), gnomAD X-48683962-G-C, REVEL 0.38, CADD 22.30
- M38I (p.Met38Ile), ExAC rs782503796, gnomAD rs782503796, REVEL 0.36, CADD 22.80
- M38R (p.Met38Arg), ExAC rs781839950, gnomAD rs781839950, REVEL 0.66, CADD 26.40
- L39P (p.Leu39Pro), gnomAD rs1557006245, REVEL 0.90, CADD 28.10
- R41* (p.Arg41Ter), rs11545907, ClinGen CA329099985, ClinVar RCV001216267, ClinVar RCV003908449, Pathogenic
- R41Q (p.Arg41Gln), NCI-TCGA Cosmic COSV6499, REVEL 0.72, CADD 28.20, Uncertain significance, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- C43R (p.Cys43Arg), 1000Genomes rs782057219, ExAC rs782057219, TOPMed rs782057219, gnomAD rs782057219, REVEL 0.87, CADD 28.10
- C43S (p.Cys43Ser), 1000Genomes rs782057219, ExAC rs782057219, TOPMed rs782057219, gnomAD rs782057219, REVEL 0.83, CADD 26.20
- C43W (p.Cys43Trp), UniProt VAR 008105, Pathogenic, in WAS
- C43Y (p.Cys43Tyr), rs2147262523, ClinGen CA412865923, ClinVar RCV002245338, Ensembl rs2147262523, AlphaMissense 0.79, MetaLR 0.97, Likely pathogenic, Wiskott-Aldrich syndrome
- L44F (p.Leu44Phe), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- L44V (p.Leu44Val), rs200530781, ClinGen CA329099999, ClinVar RCV003392830, ClinVar RCV003778288, REVEL 0.40, CADD 18.50, Uncertain significance, WAS-related disorder; not specified; Inborn genetic diseases
- T45A (p.Thr45Ala), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact., in WAS and THC1
- T45M (p.Thr45Met), rs132630273, ClinGen CA255728, NCI-TCGA Cosmic COSV6499, ClinVar RCV000011872, REVEL 0.83, AlphaMissense 0.62, Pathogenic, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- T45R (p.Thr45Arg), rs132630273, ClinGen CA412866047, ClinVar RCV003934432, AlphaMissense 0.62, MetaLR 0.98, Likely pathogenic, WAS-related disorder
- T45T (p.Thr45Thr), rs782526978, gnomAD X-48684285-G-A, CADD 0.51
- L46L (p.Leu46Leu), gnomAD X-48684286-C-T, CADD 7.37
- T48I (p.Thr48Ile), UniProt VAR 005826, Pathogenic, in THC1
- T48P (p.Thr48Pro), rs2062412197, ClinGen CA412866088, ClinVar RCV001204405, Ensembl rs2062412197, AlphaMissense 0.85, MetaLR 0.97, Likely pathogenic, Thrombocytopenia 1; X-linked severe congenital neutropenia; Wiskott-Aldrich synd
- A49S (p.Ala49Ser), Ensembl rs2147262768
- V50D (p.Val50Asp), rs2147262772, ClinGen CA412866129, ClinVar RCV001904428, Ensembl rs2147262772, REVEL 0.90, CADD 28.40, Uncertain significance, X-linked severe congenital neutropenia; Thrombocytopenia 1; Wiskott-Aldrich synd
- V50V (p.Val50Val), rs782672389, gnomAD X-48684300-T-A, CADD 14.10
- V51F (p.Val51Phe), rs2147262778, ClinGen CA412866143, ClinVar RCV001570000, Ensembl rs2147262778, AlphaMissense 0.90, MetaLR 0.99, Likely pathogenic, not provided
- V51V (p.Val51Val), rs1557006310, gnomAD X-48684303-T-C, CADD 14.20
- Q52H (p.Gln52His), rs2519278363, ClinGen CA412866170, ClinVar RCV003783759, UniProt VAR 012710, Uncertain significance, Thrombocytopenia 1; X-linked severe congenital neutropenia; Wiskott-Aldrich synd
- L53L (p.Leu53Leu), rs782305649, gnomAD X-48684309-G-A, CADD 10.70
- Y54Y (p.Tyr54Tyr), gnomAD X-48684312-C-T, CADD 10.70
- L55P (p.Leu55Pro), rs2062412293, ClinGen CA412866218, ClinVar RCV001218570, ClinVar RCV001824936, AlphaMissense 0.93, MetaLR 0.95, Uncertain significance, Thrombocytopenia 1; X-linked severe congenital neutropenia; Wiskott-Aldrich synd
- A56T (p.Ala56Thr), UniProt VAR 074020, Uncertain significance
- A56V (p.Ala56Val), rs132630269, ClinGen CA255723, NCI-TCGA Cosmic COSV6499, ClinVar RCV000011865, AlphaMissense 0.46, MetaLR 0.98, Pathogenic, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- A56A (p.Ala56Ala), rs962432903, gnomAD X-48684318-G-A, CADD 1.95
- P58H (p.Pro58His), rs132630275, ClinGen CA16621416, ClinVar RCV000485571, Ensembl rs132630275, AlphaMissense 0.19, MetaLR 0.97, Likely pathogenic, not provided
- P58L (p.Pro58Leu), UniProt VAR 022806, Pathogenic, in WAS
- P58R (p.Pro58Arg), rs132630275, ClinGen CA121361, ClinVar RCV000011875, UniProt VAR 033255, AlphaMissense 0.19, MetaLR 0.97, Pathogenic, THROMBOCYTOPENIA, X-LINKED, INTERMITTENT
- P58T (p.Pro58Thr), rs2062412365, ClinGen CA412866249, ClinVar RCV001047233, Ensembl rs2062412365, AlphaMissense 0.18, MetaLR 0.97, Pathogenic, X-linked severe congenital neutropenia; Thrombocytopenia 1; Wiskott-Aldrich synd
- P59A (p.Pro59Ala), Ensembl rs2062412404
- G60E (p.Gly60Glu), Ensembl rs1602176620
- G60R (p.Gly60Arg), gnomAD X-48684328-G-A, REVEL 0.43, CADD 20.70
- G60V (p.Gly60Val), gnomAD X-48684329-G-T, REVEL 0.73, CADD 23.70
- E62Q (p.Glu62Gln), rs141605347, ClinGen CA10403868, ClinVar RCV000907244, ESP rs141605347, REVEL 0.29, CADD 14.90, Benign, X-linked severe congenital neutropenia; Thrombocytopenia 1; Wiskott-Aldrich synd
- E62K (p.Glu62Lys), gnomAD X-48684334-G-A, REVEL 0.37, CADD 17.40
- H63Q (p.His63Gln), NCI-TCGA Cosmic COSV6499, Variant assessed as somatic; moderate impact.
- W64* (p.Trp64Ter), rs2147262855, ClinGen CA412866362, ClinVar RCV001817745, ClinVar RCV002542702, Pathogenic
- W64R (p.Trp64Arg), rs2147262851, ClinGen CA412866352, ClinVar RCV002246812, Ensembl rs2147262851, AlphaMissense 0.99, MetaLR 0.99, Pathogenic, X-linked severe congenital neutropenia
- T65N (p.Thr65Asn), rs797044478, ClinGen CA412866379, ClinVar RCV003809552, Ensembl rs797044478, REVEL 0.43, CADD 19.80, Uncertain significance, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- T65S (p.Thr65Ser), rs797044478, ClinGen CA162681, ClinVar RCV000122267, Ensembl rs797044478, REVEL 0.45, CADD 15.90, not provided, not specified
- T65T (p.Thr65Thr), gnomAD X-48684345-C-G, CADD 13.60
- K66R (p.Lys66Arg), gnomAD rs2062412510, REVEL 0.51, CADD 25.30
- E67K (p.Glu67Lys), gnomAD rs1557006329, REVEL 0.40, CADD 17.80
- E67E (p.Glu67Glu), gnomAD X-48684351-G-A, CADD 12.30
- H68Y (p.His68Tyr), NCI-TCGA Cosmic COSV6499, Variant assessed as somatic; moderate impact.
- H68H (p.His68His), rs2062412549, gnomAD X-48684354-T-C, CADD 12.40
- C69F (p.Cys69Phe), NCI-TCGA Cosmic COSV1009, Variant assessed as somatic; moderate impact.
- C69G (p.Cys69Gly), TOPMed rs1156735272, gnomAD rs1156735272, REVEL 0.59, CADD 24.70
- C69S (p.Cys69Ser), rs374283590, ClinGen CA10403869, ClinVar RCV001725810, ClinVar RCV002073401, REVEL 0.49, CADD 20.80, Conflicting interpretations, Inborn genetic diseases; Thrombocytopenia 1; Wiskott-Aldrich syndrome
- G70W (p.Gly70Trp), UniProt VAR 012711, Pathogenic, in WAS
- G70G (p.Gly70Gly), rs886038288, gnomAD X-48684360-G-A, CADD 10.90
- A71A (p.Ala71Ala), gnomAD X-48684363-T-C, CADD 14.90
- V72L (p.Val72Leu), gnomAD X-48684364-G-C, REVEL 0.50, CADD 18.90
- V72V (p.Val72Val), gnomAD X-48684366-G-A, CADD 13.20
- C73R (p.Cys73Arg), Ensembl rs1602176652, UniProt VAR 008107, Pathogenic, in WAS
- C73S (p.Cys73Ser), rs1602176652, ClinGen CA412866501, ClinVar RCV000852074, Ensembl rs1602176652, AlphaMissense 0.99, MetaLR 0.97, Uncertain significance, Thrombocytopenia
- F74F (p.Phe74Phe), rs2062412659, gnomAD X-48684372-C-T, CADD 12.80
- V75M (p.Val75Met), rs782290433, ClinGen CA10403870, ClinVar RCV000255132, ClinVar RCV000589566, REVEL 0.95, CADD 26.50, Pathogenic, in THC1
- K76T (p.Lys76Thr), rs782350319, ClinGen CA10403871, ClinVar RCV001348441, ExAC rs782350319, AlphaMissense 0.98, MetaLR 0.97, Uncertain significance, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- D77G (p.Asp77Gly), rs2519278581, ClinGen CA412866557, ClinVar RCV003402525, ClinVar RCV003778227, Conflicting interpretations, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- D77N (p.Asp77Asn), rs2147262921, ClinGen CA412866556, ClinVar RCV001420824, Ensembl rs2147262921, AlphaMissense 0.79, MetaLR 0.97, Uncertain significance, not specified
- N78K (p.Asn78Lys), gnomAD rs1557006333, REVEL 0.72, CADD 24.80
- P79H (p.Pro79His), NCI-TCGA Cosmic COSV6499, Variant assessed as somatic; moderate impact.
- P79L (p.Pro79Leu), NCI-TCGA Cosmic COSV6499, REVEL 0.85, CADD 25.40, Variant assessed as somatic; moderate impact.
- P79P (p.Pro79Pro), gnomAD X-48684387-C-T, CADD 7.65
- Q80* (p.Gln80Ter), rs2062412730, ClinGen CA412866578, ClinVar RCV001058741, Ensembl rs2062412730, Pathogenic
- Q80H (p.Gln80His), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- Q80K (p.Gln80Lys), gnomAD X-48684388-C-A, REVEL 0.43, CADD 15.80
- K81T (p.Lys81Thr), NCI-TCGA Cosmic COSV6499, Variant assessed as somatic; moderate impact.
- K81K (p.Lys81Lys), rs1164471209, gnomAD X-48684393-G-A, CADD 12.60
- S82P (p.Ser82Pro), rs132630272, ClinGen CA121359, ClinVar RCV000011871, ClinVar RCV001509116, AlphaMissense 0.99, MetaLR 0.97, Likely pathogenic, not provided
- Y83* (p.Tyr83Ter), rs368151220, ClinGen CA16621417, ClinVar RCV000480615, ESP rs368151220, Pathogenic, in THC1
- Y83C (p.Tyr83Cys), UniProt VAR 008108, Pathogenic, in THC1
- Y83Y (p.Tyr83Tyr), rs368151220, gnomAD X-48684399-C-T, CADD 9.28
- F84L (p.Phe84Leu), rs2147262951, ClinGen CA412866605, ClinVar RCV001379030, Ensembl rs2147262951, AlphaMissense 0.99, MetaLR 0.97, Likely pathogenic, Wiskott-Aldrich syndrome
- I85I (p.Ile85Ile), rs2062412795, gnomAD X-48684405-C-T, CADD 9.03
- R86A (p.Arg86Ala), rs2519278652, ClinGen CA2580617034, ClinVar RCV003226667, ClinVar RCV003779810, Pathogenic, in WAS
- R86C (p.Arg86Cys), rs2062412810, ClinGen CA412866620, NCI-TCGA Cosmic COSV1009, ClinVar RCV001205113, REVEL 0.95, CADD 27.40, Pathogenic, Thrombocytopenia 1; X-linked severe congenital neutropenia; Wiskott-Aldrich synd
- R86H (p.Arg86His), rs132630268, ClinGen CA341003, ClinVar RCV000011864, ClinVar RCV000414284, REVEL 0.92, AlphaMissense 0.99, Pathogenic, Wiskott-Aldrich syndrome; Thrombocytopenia 1; X-linked severe congenital neutrop
- R86L (p.Arg86Leu), rs132630268, ClinGen CA341001, ClinVar RCV000011863, UniProt VAR 005831, AlphaMissense 0.99, MetaLR 0.98, Pathogenic, Wiskott-Aldrich syndrome
- R86P (p.Arg86Pro), rs132630268, ClinGen CA412866623, ClinVar RCV000780795, Ensembl rs132630268, AlphaMissense 0.99, MetaLR 0.98, Likely pathogenic, Wiskott-Aldrich syndrome
- R86R (p.Arg86Arg), rs1255975476, gnomAD X-48684408-C-T, CADD 9.91
- L87I (p.Leu87Ile), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- Y88* (p.Tyr88Ter), rs150520117, ClinGen CA412866647, ClinVar RCV003041444, Pathogenic
- Y88Y (p.Tyr88Tyr), rs150520117, gnomAD X-48684414-C-T, CADD 1.03
- G89D (p.Gly89Asp), rs139857045, ClinGen CA10403875, ClinVar RCV000812382, ClinVar RCV003480857, REVEL 0.55, CADD 17.80, Conflicting interpretations, Thrombocytopenia 1; Wiskott-Aldrich syndrome; X-linked severe congenital neutrop
- G89S (p.Gly89Ser), ExAC rs782405509, TOPMed rs782405509, gnomAD rs782405509, REVEL 0.48, CADD 17.10
- G89R (p.Gly89Arg), gnomAD X-48684415-G-C, REVEL 0.70, CADD 23.30
- L90F (p.Leu90Phe), gnomAD rs1557006353
- L90I (p.Leu90Ile), gnomAD rs1557006353
- Q91* (p.Gln91Ter), rs1557006354, ClinGen CA412866685, ClinVar RCV000633306, Ensembl rs1557006354, Pathogenic
- Q91H (p.Gln91His), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- Q91K (p.Gln91Lys), NCI-TCGA Cosmic COSV1009, Variant assessed as somatic; moderate impact.
- Q91R (p.Gln91Arg), gnomAD X-48684422-A-G, REVEL 0.51, CADD 26.70
- A92=, NCI-TCGA TCGA novel, Variant assessed as somatic; low impact.
- A92D (p.Ala92Asp), NCI-TCGA Cosmic COSV1009, REVEL 0.45, CADD 17.00, Variant assessed as somatic; moderate impact.
- A92S (p.Ala92Ser), gnomAD X-48685547-G-T, REVEL 0.42, CADD 24.10
- A92T (p.Ala92Thr), gnomAD X-48685547-G-A, REVEL 0.48, CADD 22.40
- A92A (p.Ala92Ala), gnomAD X-48685549-T-C, CADD 14.90
- G93D (p.Gly93Asp), Ensembl rs2062416041, REVEL 0.75, CADD 25.90
- G93C (p.Gly93Cys), gnomAD X-48685550-G-T, REVEL 0.82, CADD 26.60
Public WAS analysis runs
- WAS analysis run — WAS (788 variants) — completed 2026-08-19