L109F (p.Leu109Phe) variant of SLC2A1 (P11166)
L109F (p.Leu109Phe) in SLC2A1 (P11166) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as uncertain significance in the context of GLUT1 deficiency syndrome 1, autosomal recessive. The available variant effect predictions contribute to a CATVariant prioritization score of 0.47 / 1. The record also includes population frequency data and structural context.
L109F (p.Leu109Phe) variant details
- p.Leu109Phe
- rs1436569888
- ClinGen CA339961231
- ClinVar RCV002298353
- gnomAD rs1436569888
- Uncertain significance
- GLUT1 deficiency syndrome 1, autosomal recessive
- Missense
- Variant Prioritization Score for Impact Estimate 0.466
- REVEL 0.39
- AlphaMissense 0.13
- MetaLR 0.41
- MetaSVM -0.37
- CADD 22.40
- PolyPhen-2 0.15
- ClinVar: Uncertain significance (GLUT1 deficiency syndrome 1, autosomal recessive)
- EBI: Variant of uncertain significance
- UniProt: Uncertain significance
- Most common in the Non-Finnish European population (allele frequency 3.6e-06)
- Structural context available