F38Y (p.Phe38Tyr) variant of HLA-DPB1 (P04440)
F38Y (p.Phe38Tyr) in HLA-DPB1 (P04440) is a missense change. Clinical records from EBI and UniProt describe it as benign in the context of in allele DPB1*01:01, allele DPB1*03:01, allele DPB1*05:02, allele DPB1*06:01, a. The available variant effect predictions contribute to a CATVariant prioritization score of 0.17 / 1. The record also includes population frequency data and structural context.
F38Y (p.Phe38Tyr) variant details
- p.Phe38Tyr
- rs1126509
- 1000Genomes rs1126509
- ESP rs1126509
- ExAC rs1126509
- Benign
- in allele DPB1*01:01, allele DPB1*03:01, allele DPB1*05:02, allele DPB1*06:01, a
- Missense
- Variant Prioritization Score for Impact Estimate 0.167
- REVEL 0.23
- CADD 0.28
- PolyPhen-2 0.00
- SIFT 1.00
- EBI: Benign (in allele DPB1*01:01, allele DPB1*03:01, allele DPB1*05:02, alle)
- UniProt: Benign (in allele DPB1*01:01, allele DPB1*03:01, allele DPB1*05:02, alle)
- Most common in the 1KG:YRI population (allele frequency 0.76)
- Structural context available