G252D (p.Gly252Asp) variant of COL4A4 (Collagen alpha-4(IV) chain)
G252D (p.Gly252Asp) in COL4A4 (Collagen alpha-4(IV) chain) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as pathogenic/likely pathogenic in the context of Autosomal recessive Alport syndrome; Hematuria, benign familial, 1; Benign famil. The available variant effect predictions contribute to a CATVariant prioritization score of 0.80 / 1. The record also includes population frequency data, published literature, and structural context.
G252D (p.Gly252Asp) variant details
- p.Gly252Asp
- rs760795817
- ClinGen CA350858400
- ClinVar RCV001089930
- ClinVar RCV002468621
- Pathogenic/Likely pathogenic
- Autosomal recessive Alport syndrome; Hematuria, benign familial, 1; Benign famil
- Missense
- Variant Prioritization Score for Impact Estimate 0.801
- REVEL 0.77
- AlphaMissense 0.74
- MetaLR 0.93
- MetaSVM 1.08
- CADD 26.00
- PolyPhen-2 1.00
- ClinVar: Pathogenic/Likely pathogenic (Autosomal recessive Alport syndrome; Hematuria, benign familial,)
- EBI: Pathogenic
- UniProt: Pathogenic
- Most common in the Non-Finnish European population (allele frequency 9e-07)
- Structural context available
- Cited in: Alport Syndrome. (PMID 20301386)
- Cited in: Clinical utility gene card for: Alport syndrome. (PMID 22166944)