W5C (p.Trp5Cys) variant of BRIP1 (Fanconi anemia group J protein)
W5C (p.Trp5Cys) in BRIP1 (Fanconi anemia group J protein) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as uncertain significance in the context of Familial cancer of breast; Fanconi anemia complementation group J. The available variant effect predictions contribute to a CATVariant prioritization score of 0.31 / 1. The record also includes published literature and structural context.
W5C (p.Trp5Cys) variant details
- p.Trp5Cys
- rs2078973424
- ClinGen CA400486070
- ClinVar RCV001319299
- ClinVar RCV005532942
- Uncertain significance
- Familial cancer of breast; Fanconi anemia complementation group J
- Missense
- Variant Prioritization Score for Impact Estimate 0.307
- AlphaMissense 0.18
- MetaLR 0.12
- MetaSVM -1.02
- PolyPhen-2 0.00
- SIFT 0.18
- EVE 0.11
- ClinVar: Uncertain significance (Familial cancer of breast; Fanconi anemia complementation group)
- EBI: Pathogenic
- UniProt: Pathogenic
- Structural context available
- Cited in: Genetic cancer risk assessment and counseling: recommendations of the national society of genetic counselors. (PMID 15604628)
- Cited in: Risk assessment and genetic counseling for hereditary breast and ovarian cancer: recommendations of the National… (PMID 17508274)