A4T (p.Ala4Thr) variant of APC (Adenomatous polyposis coli protein)
A4T (p.Ala4Thr) in APC (Adenomatous polyposis coli protein) is a missense change. Clinical records from EBI and UniProt describe it as uncertain significance. The available variant effect predictions contribute to a CATVariant prioritization score of 0.26 / 1. The record also includes published literature and structural context.
A4T (p.Ala4Thr) variant details
- p.Ala4Thr
- rs774219012
- ClinGen CA16021355
- NCI-TCGA Cosmic COSV5738
- cosmic curated COSV57383
- Uncertain significance
- Missense
- Variant Prioritization Score for Impact Estimate 0.256
- ESM-1b 0.00
- AlphaMissense 0.54
- MetaLR 0.14
- MetaSVM -0.96
- PolyPhen-2 1.00
- SIFT 0.00
- EBI: Variant of uncertain significance
- UniProt: Uncertain significance
- Structural context available
- Cited in: Practice parameters for the identification and testing of patients at risk for dominantly inherited colorectal… (PMID 11598466)
- Cited in: Genetic cancer risk assessment and counseling: recommendations of the national society of genetic counselors. (PMID 15604628)