T13R (p.Thr13Arg) variant of STK11 (Q15831)
T13R (p.Thr13Arg) in STK11 (Q15831) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as uncertain significance in the context of Peutz-Jeghers syndrome. The available variant effect predictions contribute to a CATVariant prioritization score of 0.34 / 1. The record also includes published literature and structural context.
T13R (p.Thr13Arg) variant details
- p.Thr13Arg
- rs1599914790
- ClinGen CA402943169
- ClinVar RCV001897931
- Ensembl rs1599914790
- Uncertain significance
- Peutz-Jeghers syndrome
- Missense
- Variant Prioritization Score for Impact Estimate 0.335
- AlphaMissense 0.09
- MetaLR 0.16
- MetaSVM -0.93
- PolyPhen-2 0.02
- SIFT 0.10
- MutPred 0.30
- ClinVar: Uncertain significance (Peutz-Jeghers syndrome)
- EBI: Variant of uncertain significance
- UniProt: Uncertain significance
- Structural context available
- Cited in: Genetic cancer risk assessment and counseling: recommendations of the national society of genetic counselors. (PMID 15604628)
- Cited in: Peutz-Jeghers Syndrome. (PMID 20301443)