S456R (p.Ser456Arg) variant of SLC6A1 (P30531)
S456R (p.Ser456Arg) in SLC6A1 (P30531) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as pathogenic in the context of Epilepsy with myoclonic atonic seizures. The available variant effect predictions contribute to a CATVariant prioritization score of 0.79 / 1. The record also includes published literature and structural context.
S456R (p.Ser456Arg) variant details
- p.Ser456Arg
- rs1697893468
- ClinGen CA351791436
- ClinVar RCV005057094
- Ensembl rs1697893468
- Pathogenic
- Epilepsy with myoclonic atonic seizures
- Missense
- Variant Prioritization Score for Impact Estimate 0.792
- AlphaMissense 0.96
- MetaLR 0.73
- MetaSVM 0.73
- PolyPhen-2 1.00
- SIFT 0.00
- EVE 0.73
- ClinVar: Pathogenic (Epilepsy with myoclonic atonic seizures)
- EBI: Pathogenic
- UniProt: Pathogenic
- Structural context available
- Cited in: SLC6A1-Related Neurodevelopmental Disorder. (PMID 36780407)