W844C (p.Trp844Cys) variant of PTCH1 (Protein patched homolog 1)
W844C (p.Trp844Cys) in PTCH1 (Protein patched homolog 1) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as pathogenic in the context of Gorlin syndrome. The available variant effect predictions contribute to a CATVariant prioritization score of 0.80 / 1. The record also includes published literature and structural context.
W844C (p.Trp844Cys) variant details
- p.Trp844Cys
- rs1840077192
- ClinGen CA374113771
- ClinVar RCV001953154
- Ensembl rs1840077192
- Pathogenic
- Gorlin syndrome
- Missense
- Variant Prioritization Score for Impact Estimate 0.804
- AlphaMissense 1.00
- MetaLR 0.77
- MetaSVM 0.71
- PolyPhen-2 1.00
- SIFT 0.00
- EVE 0.73
- ClinVar: Pathogenic (Gorlin syndrome)
- EBI: Pathogenic
- UniProt: Pathogenic
- Structural context available
- Cited in: Genetic cancer risk assessment and counseling: recommendations of the national society of genetic counselors. (PMID 15604628)
- Cited in: Nevoid Basal Cell Carcinoma Syndrome. (PMID 20301330)