A99T (p.Ala99Thr) variant of NLGN3 (Neuroligin-3)
A99T (p.Ala99Thr) in NLGN3 (Neuroligin-3) is a missense change. Clinical records from UniProt describe it as variant assessed as somatic; moderate impact. The available variant effect predictions contribute to a CATVariant prioritization score of 0.65 / 1. The record also includes population frequency data and structural context.
A99T (p.Ala99Thr) variant details
- p.Ala99Thr
- rs1342353331
- NCI-TCGA Cosmic COSV6244
- cosmic curated COSV62443
- Variant assessed as somatic; moderate impact.
- Missense
- Variant Prioritization Score for Impact Estimate 0.651
- REVEL 0.65
- CADD 23.80
- PolyPhen-2 0.10
- SIFT 0.02
- UniProt: Variant assessed as somatic; moderate impact.
- Most common in the Latino/Admixed American population (allele frequency 2.8e-05)
- Structural context available