P9T (p.Pro9Thr) variant of LRBA (P50851)
P9T (p.Pro9Thr) in LRBA (P50851) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as uncertain significance in the context of Combined immunodeficiency due to LRBA deficiency. The available variant effect predictions contribute to a CATVariant prioritization score of 0.47 / 1. The record also includes population frequency data.
P9T (p.Pro9Thr) variant details
- p.Pro9Thr
- rs1465852898
- ClinGen CA358611219
- ClinVar RCV001882159
- TOPMed rs1465852898
- Uncertain significance
- Combined immunodeficiency due to LRBA deficiency
- Missense
- Variant Prioritization Score for Impact Estimate 0.467
- MetaLR 0.11
- MetaSVM -0.99
- CADD 21.80
- PolyPhen-2 0.13
- SIFT 0.26
- ClinVar: Uncertain significance (Combined immunodeficiency due to LRBA deficiency)
- EBI: Variant of uncertain significance
- UniProt: Uncertain significance
- Most common in the Non-Finnish European population (allele frequency 2.7e-06)