T75M (p.Thr75Met) variant of KCNJ2 (P63252)
T75M (p.Thr75Met) in KCNJ2 (P63252) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as pathogenic/likely pathogenic in the context of Cardiovascular phenotype; not provided; Short QT syndrome type 3. The available variant effect predictions contribute to a CATVariant prioritization score of 0.95 / 1. The record also includes published literature and structural context.
T75M (p.Thr75Met) variant details
- p.Thr75Met
- rs104894585
- ClinGen CA302067
- cosmic curated COSV54664
- ClinVar RCV000058302
- Pathogenic/Likely pathogenic
- Cardiovascular phenotype; not provided; Short QT syndrome type 3
- Missense
- Variant Prioritization Score for Impact Estimate 0.955
- AlphaMissense 0.99
- MetaLR 0.96
- MetaSVM 1.09
- PolyPhen-2 1.00
- SIFT 0.00
- EVE 0.89
- ClinVar: Pathogenic/Likely pathogenic (Cardiovascular phenotype; not provided; Short QT syndrome type 3)
- EBI: Pathogenic (in LQT7)
- UniProt: Pathogenic (in LQT7)
- Structural context available
- Cited in: EFNS guidelines on the molecular diagnosis of channelopathies, epilepsies, migraine, stroke, and dementias. (PMID 20298421)
- Cited in: Long QT Syndrome Overview. (PMID 20301308)