T122I (p.Thr122Ile) variant of HLA-DQB1 (P01920)
T122I (p.Thr122Ile) in HLA-DQB1 (P01920) is a missense change. Clinical records from EBI and UniProt describe it as benign in the context of in allele DQB1*05:01, allele DQB1*05:02, allele DQB1*05:03, allele DQB1*05:05, a. The available variant effect predictions contribute to a CATVariant prioritization score of 0.27 / 1. The record also includes structural context.
T122I (p.Thr122Ile) variant details
- p.Thr122Ile
- rs1140320
- UniProt VAR 062738
- 1000Genomes rs1140320
- ExAC rs1140320
- Benign
- in allele DQB1*05:01, allele DQB1*05:02, allele DQB1*05:03, allele DQB1*05:05, a
- Missense
- Variant Prioritization Score for Impact Estimate 0.272
- AlphaMissense 0.20
- MetaLR 0.00
- MetaSVM -0.95
- PolyPhen-2 0.00
- SIFT 0.01
- MutPred 0.41
- EBI: Benign (in allele DQB1*05:01, allele DQB1*05:02, allele DQB1*05:03, alle)
- UniProt: Benign (in allele DQB1*05:01, allele DQB1*05:02, allele DQB1*05:03, alle)
- Structural context available