A15G (p.Ala15Gly) variant of HLA-B (P01889)
A15G (p.Ala15Gly) in HLA-B (P01889) is a missense change. Clinical records from EBI and UniProt describe it as benign in the context of in allele B*13:02, allele B*15:01, allele B*18:01, allele B*27:01, allele B*27:0. The available variant effect predictions contribute to a CATVariant prioritization score of 0.15 / 1. The record also includes population frequency data, published literature, and structural context.
A15G (p.Ala15Gly) variant details
- p.Ala15Gly
- Ensembl rs796362505
- Benign
- in allele B*13:02, allele B*15:01, allele B*18:01, allele B*27:01, allele B*27:0
- Missense
- Variant Prioritization Score for Impact Estimate 0.154
- REVEL 0.14
- CADD 13.50
- PolyPhen-2 0.00
- SIFT 1.00
- EBI: Benign (in allele B*13:02, allele B*15:01, allele B*18:01, allele B*27:0)
- UniProt: Benign (in allele B*13:02, allele B*15:01, allele B*18:01, allele B*27:0)
- Most common in the HGDP:PAPUANHIGHLANDS population (allele frequency 1)
- Structural context available
- Cited in: Diversity of HLA-B17 alleles and haplotypes in East Asians and a novel Cw6 allele (Cw*0604) associated with B*5701. (PMID 10395103)
- Cited in: Cloning and sequencing full-length HLA-B and -C genes. (PMID 12622774)