GJA5 (Gap junction alpha-5 protein) variants and mutations
GJA5 (also known as Gap junction alpha-5 protein) is a human protein-coding gene encoding a gap junction alpha-5 protein. It forms connexin 40 gap junctions that support rapid electrical coupling in atrial myocardium and the cardiac conduction system. Pathogenic variants can predispose to atrial fibrillation and conduction disease, and altered expression can disrupt coordinated cardiac impulse propagation. This analysis covers 884 GJA5 variants and mutations. Of these, 89% have computational variant effect predictions. Disease context includes familial atrial fibrillation, Atrial stand still, and atrial fibrillation. Example GJA5 variants include G2C, G2R, and G2G.
Variant analysis overview
- Gene: GJA5
- Protein: Gap junction alpha-5 protein
- UniProt accession: P36382
- Organism: Homo sapiens
- Variants analyzed: 884
- Variant scope: all variants
- Completed: 2026-08-19
Variant and mutation evidence
- Variant composition: 531 unspecified-consequence records; 1 stop lost; 150 missense variants; 172 synonymous variants; 4 stop-gained variants; 22 frameshift variants; 4 in-frame deletions
- Prediction scores: 785 variants have prediction scores (89% of the analyzed set).
Clinical, disease, and population context
- Disease context: 25 disease associations are represented. Top associations: familial atrial fibrillation, Atrial stand still, atrial fibrillation, atrial flutter, cardioembolic stroke, cardiac arrhythmia, chronic obstructive pulmonary disease, hereditary disease, Loss of consciousness, adolescent idiopathic scoliosis, liver disorder, ovarian dysfunction.
Protein structure and variant hotspots
- Protein features: 4 transmembrane segments; 2 post-translational modification sites.
- Structural context: 189 variants have structural context.
- PTM context: 6 variants overlap post-translational modification sites.
Data sources
Evidence in this analysis draws on EBI Proteins Variation, UniProt, gnomAD v4, EuropePMC, Interaction Network Analysis, AlphaFold DB, gnomAD constraint, Open Targets, ClinGen, MaveDB, LitVar.
Notable GJA5 variants
Examples include G2C, G2R, G2G, D3N, D3Y, D3D, W4*, S5G. Listed records include available protein-change notation, database identifiers, clinical classifications, computational predictions, population evidence, experimental measurements, and disease context.
- G2C (p.Gly2Cys), NCI-TCGA Cosmic COSV9960, cosmic curated COSV99605, Variant assessed as somatic; moderate impact.
- G2R (p.Gly2Arg), rs2148959534, ClinGen CA342399936, ClinVar RCV001891628, Ensembl rs2148959534, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- G2G (p.Gly2Gly), rs1553227118, gnomAD 1-147759233-G-A, CADD 2.73
- D3N (p.Asp3Asn), cosmic curated COSV10504, MetaLR 0.96, MetaSVM 1.11
- D3Y (p.Asp3Tyr), Ensembl rs2148959530
- D3D (p.Asp3Asp), rs587770589, gnomAD 1-147759230-A-G, CADD 10.70
- W4* (p.Trp4Ter), gnomAD rs1663891360, CADD 37.00
- S5G (p.Ser5Gly), rs144069395, ClinGen CA1065823, ClinVar RCV000328129, ClinVar RCV002059323, MetaLR 0.88, MetaSVM 0.99, Conflicting interpretations, Atrial standstill 1; Atrial fibrillation, familial, 11
- S5R (p.Ser5Arg), cosmic curated COSV54784, MetaLR 0.96, MetaSVM 1.09
- S5S (p.Ser5Ser), rs1164763532, gnomAD 1-147759224-G-A, CADD 10.90
- S5T (p.Ser5Thr), gnomAD 1-147759225-C-G, MetaLR 0.96, MetaSVM 1.11
- L7W (p.Leu7Trp), gnomAD 1-147759219-AG-A, CADD 24.30
- G8E (p.Gly8Glu), cosmic curated COSV10504
- G8G (p.Gly8Gly), rs781784744, gnomAD 1-147759215-T-G, CADD 1.22
- N9N (p.Asn9Asn), gnomAD 1-147759212-A-G, CADD 3.80
- F10C (p.Phe10Cys), NCI-TCGA Cosmic COSV5478, cosmic curated COSV54784, MetaLR 0.96, MetaSVM 1.11, Variant assessed as somatic; moderate impact.
- F10F (p.Phe10Phe), rs1350829557, gnomAD 1-147759209-G-A, CADD 6.44
- F10V (p.Phe10Val), gnomAD 1-147759211-A-C, MetaLR 0.84, MetaSVM 0.77
- E12* (p.Glu12Ter), gnomAD rs1553227114
- E12D (p.Glu12Asp), ExAC rs782806068, TOPMed rs782806068, gnomAD rs782806068, MetaLR 0.92, MetaSVM 0.93
- E12E (p.Glu12Glu), gnomAD 1-147759203-C-T, CADD 5.49
- E13D (p.Glu13Asp), cosmic curated COSV54782, Ensembl rs1663890172
- E13G (p.Glu13Gly), rs1663890298, ClinGen CA342399698, ClinVar RCV001768296, TOPMed rs1663890298, Uncertain significance, not provided
- E13K (p.Glu13Lys), NCI-TCGA Cosmic COSV5478, cosmic curated COSV54785, Ensembl rs2148959514, MetaLR 0.92, MetaSVM 0.94, Variant assessed as somatic; moderate impact.
- V14A (p.Val14Ala), ESP rs373059679, TOPMed rs373059679, MetaLR 0.96, MetaSVM 1.06
- H15Q (p.His15Gln), cosmic curated COSV54782, MetaLR 0.97, MetaSVM 1.10
- H15R (p.His15Arg), gnomAD 1-147759181-CGGTC, CADD 26.90
- K16M (p.Lys16Met), NCI-TCGA Cosmic COSV9960, cosmic curated COSV99605, MetaLR 0.97, MetaSVM 1.10, Variant assessed as somatic; moderate impact.
- K16R (p.Lys16Arg), gnomAD rs1553227111, MetaLR 0.94, MetaSVM 1.11
- K16K (p.Lys16Lys), gnomAD 1-147759191-C-T, CADD 7.90
- K16N (p.Lys16Asn), gnomAD 1-147759191-C-A, MetaLR 0.94, MetaSVM 1.03
- S18L (p.Ser18Leu), rs782537233, ClinGen CA1065820, ClinVar RCV001757592, ClinVar RCV006557690, MetaLR 0.99, MetaSVM 0.99, Uncertain significance, Atrial fibrillation, familial, 11; Atrial standstill 1; not provided
- S18S (p.Ser18Ser), rs1426951446, gnomAD 1-147759185-C-T, CADD 5.92
- S18T (p.Ser18Thr), gnomAD 1-147759187-A-T, MetaLR 0.99, MetaSVM 1.02
- T19N (p.Thr19Asn), gnomAD rs1553227106, MetaLR 0.99, MetaSVM 1.01
- T19T (p.Thr19Thr), rs781870765, gnomAD 1-147759182-G-C, CADD 0.32
- V20M (p.Val20Met), cosmic curated COSV54783, TOPMed rs1360158783, MetaLR 0.89, MetaSVM 0.93
- V21A (p.Val21Ala), TOPMed rs1400650795, gnomAD rs1400650795, MetaLR 0.97, MetaSVM 1.10, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- V21G (p.Val21Gly), gnomAD 1-147759177-A-C, MetaLR 0.97, MetaSVM 1.10
- G22D (p.Gly22Asp), gnomAD 1-147759174-C-T, MetaLR 0.99, MetaSVM 0.96
- K23N (p.Lys23Asn), cosmic curated COSV54784, Ensembl rs981040058, MetaLR 0.98, MetaSVM 1.06
- V24F (p.Val24Phe), cosmic curated COSV99605
- V24I (p.Val24Ile), Ensembl rs1663888553
- V24V (p.Val24Val), rs782751879, gnomAD 1-147759167-G-A, CADD 9.12
- V24L (p.Val24Leu), gnomAD 1-147759169-C-G, MetaLR 0.95, MetaSVM 1.11
- L26F (p.Leu26Phe), rs2524612562, ClinGen CA342399481, ClinVar RCV003802568, Uncertain significance, Atrial fibrillation, familial, 11; Atrial standstill 1
- T27T (p.Thr27Thr), rs139182851, gnomAD 1-147759158-A-G, CADD 0.85
- V28V (p.Val28Val), rs1663888085, gnomAD 1-147759155-G-T, CADD 4.36
- V28D (p.Val28Asp), gnomAD 1-147759156-A-T, MetaLR 0.99, MetaSVM 1.01
- L29L (p.Leu29Leu), rs1553227100, gnomAD 1-147759152-G-A, CADD 7.77
- L29P (p.Leu29Pro), gnomAD 1-147759153-A-G, MetaLR 0.99, MetaSVM 1.00
- F30I (p.Phe30Ile), TOPMed rs1226525363
- F30L (p.Phe30Leu), TOPMed rs1226525363, MetaLR 0.97, MetaSVM 1.10
- F30S (p.Phe30Ser), gnomAD 1-147759150-A-G, MetaLR 0.99, MetaSVM 1.01
- I31L (p.Ile31Leu), gnomAD 1-147759148-T-G, MetaLR 0.96, MetaSVM 1.11
- I31V (p.Ile31Val), gnomAD 1-147759148-T-C, MetaLR 0.96, MetaSVM 1.10
- F32L (p.Phe32Leu), NCI-TCGA Cosmic COSV9960, cosmic curated COSV99605, MetaLR 0.97, MetaSVM 1.10, Variant assessed as somatic; moderate impact.
- F32F (p.Phe32Phe), rs1663887566, gnomAD 1-147759143-G-A, CADD 10.80
- R33C (p.Arg33Cys), NCI-TCGA Cosmic COSV5478, cosmic curated COSV54782, TOPMed rs1663887420, Variant assessed as somatic; moderate impact.
- R33H (p.Arg33His), TOPMed rs1311922669, gnomAD rs1311922669, MetaLR 0.99, MetaSVM 0.95
- R33L (p.Arg33Leu), TOPMed rs1311922669, gnomAD rs1311922669, MetaLR 0.99, MetaSVM 0.95
- R33P (p.Arg33Pro), TOPMed rs1311922669, gnomAD rs1311922669, MetaLR 0.99, MetaSVM 0.95
- R33R (p.Arg33Arg), rs587616919, gnomAD 1-147759140-A-G, CADD 9.62
- M34I (p.Met34Ile), cosmic curated COSV54784, MetaLR 0.57, MetaSVM -0.11, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- L35L (p.Leu35Leu), rs1553227091, gnomAD 1-147759134-G-A, CADD 6.76
- V36A (p.Val36Ala), gnomAD rs1663886437, MetaLR 0.98, MetaSVM 1.04
- V36M (p.Val36Met), rs1557944007, NCI-TCGA Cosmic COSV5478, cosmic curated COSV54783, Ensembl rs1557944007, Variant assessed as somatic; moderate impact.
- L37R (p.Leu37Arg), gnomAD rs1553227090, MetaLR 0.99, MetaSVM 1.02
- L37L (p.Leu37Leu), rs138362351, gnomAD 1-147759128-C-T, CADD 10.60
- G38C (p.Gly38Cys), NCI-TCGA Cosmic COSV9960, cosmic curated COSV99605, Variant assessed as somatic; moderate impact.
- G38V (p.Gly38Val), Ensembl rs2148959471, MetaLR 0.93, MetaSVM 1.09
- G38G (p.Gly38Gly), gnomAD 1-147759125-G-T, CADD 10.30
- G38A (p.Gly38Ala), gnomAD 1-147759126-C-G, MetaLR 0.95, MetaSVM 1.12
- T39K (p.Thr39Lys), cosmic curated COSV10721, MetaLR 0.85, MetaSVM 0.91
- T39T (p.Thr39Thr), rs2148959468, gnomAD 1-147759122-T-C, CADD 2.72
- A40T (p.Ala40Thr), TOPMed rs1663885804, Uncertain significance, Atrial fibrillation, familial, 11; Atrial standstill 1
- A40A (p.Ala40Ala), rs782775686, gnomAD 1-147759119-A-G, CADD 0.83
- A41G (p.Ala41Gly), cosmic curated COSV54787, MetaLR 0.95, MetaSVM 1.10
- A41S (p.Ala41Ser), TOPMed rs1663885348, gnomAD rs1663885348, MetaLR 0.98, MetaSVM 1.06
- E42Q (p.Glu42Gln), NCI-TCGA Cosmic COSV9960, cosmic curated COSV99605, Variant assessed as somatic; moderate impact.
- E42V (p.Glu42Val), Ensembl rs2148959451, MetaLR 0.98, MetaSVM 1.07
- S43P (p.Ser43Pro), gnomAD 1-147759112-A-G, MetaLR 0.91, MetaSVM 1.03
- S44F (p.Ser44Phe), cosmic curated COSV54786, MetaLR 0.97, MetaSVM 1.12
- W45C (p.Trp45Cys), TOPMed rs1283385878, gnomAD rs1283385878, MetaLR 0.99, MetaSVM 1.03, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- W45S (p.Trp45Ser), gnomAD rs1553227085, MetaLR 0.99, MetaSVM 1.03
- G46G (p.Gly46Gly), rs984101534, gnomAD 1-147759101-C-T, CADD 0.41
- D47M (p.Asp47Met), rs782528459, NCI-TCGA Cosmic COSV5478, Variant assessed as somatic; high impact.
- D47N (p.Asp47Asn), cosmic curated COSV54784, MetaLR 0.98, MetaSVM 0.85
- D47G (p.Asp47Gly), gnomAD 1-147759099-T-TC, CADD 25.60
- E48* (p.Glu48Ter), cosmic curated COSV54786
- E48K (p.Glu48Lys), rs2524612310, ClinGen CA342398176, ClinVar RCV004390779, MetaLR 0.99, MetaSVM 0.98, Uncertain significance, Inborn genetic diseases
- Q49* (p.Gln49Ter), rs387906612, ClinGen CA128541, ClinVar RCV000022512, Ensembl rs387906612, CADD 36.00, Pathogenic
- Q49Q (p.Gln49Gln), rs1487739192, gnomAD 1-147759092-C-T, CADD 9.86
- A50S (p.Ala50Ser), ExAC rs782167622, gnomAD rs782167622, MetaLR 0.45, MetaSVM -0.47, Uncertain significance
- A50T (p.Ala50Thr), rs782167622, ClinGen CA342398137, ClinVar RCV000791685, ExAC rs782167622, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- A50G (p.Ala50Gly), gnomAD 1-147759090-G-C, MetaLR 0.89, MetaSVM 1.00
- D51N (p.Asp51Asn), NCI-TCGA Cosmic COSV5478, cosmic curated COSV54785, MetaLR 0.88, MetaSVM 0.19, Variant assessed as somatic; moderate impact.
- F52L (p.Phe52Leu), cosmic curated COSV54786, MetaLR 0.99, MetaSVM 0.97
- R53Q (p.Arg53Gln), Ensembl rs1663881970, MetaLR 0.69, MetaSVM 0.48
- R53W (p.Arg53Trp), rs1553227081, NCI-TCGA Cosmic COSV9960, cosmic curated COSV99605, gnomAD rs1553227081, MetaLR 0.92, MetaSVM 0.72, Variant assessed as somatic; moderate impact.
- C54R (p.Cys54Arg), rs1216121818, ClinGen CA342398058, ClinVar RCV002666781, TOPMed rs1216121818, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- C54F (p.Cys54Phe), gnomAD 1-147759070-TCGTA, CADD 31.00
- C54C (p.Cys54Cys), gnomAD 1-147759077-A-G, CADD 3.15
- D55G (p.Asp55Gly), TOPMed rs1243331504, gnomAD rs1243331504, MetaLR 0.97, MetaSVM 1.09
- D55D (p.Asp55Asp), gnomAD 1-147759074-A-G, CADD 3.11
- T56A (p.Thr56Ala), cosmic curated COSV10961, Ensembl rs951459667
- T56K (p.Thr56Lys), TOPMed rs1663881222, MetaLR 0.99, MetaSVM 1.00
- T56M (p.Thr56Met), NCI-TCGA Cosmic COSV5478, cosmic curated COSV54784, MetaLR 0.99, MetaSVM 0.99, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- T56T (p.Thr56Thr), gnomAD 1-147759071-C-T, CADD 1.80
- I57S (p.Ile57Ser), rs1553227077, ClinGen CA342397979, ClinVar RCV001372445, ClinVar RCV003169916, MetaLR 0.77, MetaSVM 0.34, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11; not provided
- Q58Q (p.Gln58Gln), rs782027043, gnomAD 1-147759065-C-T, CADD 9.04
- Q58S (p.Gln58Ser), rs1663880776, gnomAD 1-147759067-GA-G, CADD 12.70
- P59L (p.Pro59Leu), rs2524612113, ClinGen CA342397956, ClinVar RCV003804393, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- G60A (p.Gly60Ala), Ensembl rs1571067704
- G60V (p.Gly60Val), NCI-TCGA TCGA novel, MetaLR 1.00, MetaSVM 0.94, Variant assessed as somatic; moderate impact.
- G60G (p.Gly60Gly), rs1553227075, gnomAD 1-147759059-G-A, CADD 8.74
- Q62H (p.Gln62His), ExAC rs782397054, TOPMed rs782397054, gnomAD rs782397054
- Q62Q (p.Gln62Gln), rs782397054, gnomAD 1-147759053-C-T, CADD 10.40
- Q62* (p.Gln62Ter), gnomAD 1-147759055-G-A, CADD 35.00
- C65Y (p.Cys65Tyr), gnomAD 1-147759045-C-T, MetaLR 0.99, MetaSVM 0.94
- Y66Y (p.Tyr66Tyr), rs1482027192, gnomAD 1-147759041-G-A, CADD 1.91
- D67A (p.Asp67Ala), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact.
- D67N (p.Asp67Asn), rs150906806, ClinGen CA1065810, cosmic curated COSV54786, ClinVar RCV001317751, MetaLR 0.98, MetaSVM 1.09, Uncertain significance, Atrial fibrillation, familial, 11; Atrial standstill 1; not provided
- D67V (p.Asp67Val), Ensembl rs201723672
- D67Y (p.Asp67Tyr), rs150906806, ClinGen CA342397805, ClinVar RCV000822679, 1000Genomes rs150906806, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- D67D (p.Asp67Asp), rs781974630, gnomAD 1-147759038-G-A, CADD 10.10
- Q68* (p.Gln68Ter), NCI-TCGA Cosmic COSV9960, cosmic curated COSV99605, CADD 36.00, Variant assessed as somatic; high impact.
- Q68R (p.Gln68Arg), rs782334211, ClinGen CA1065808, ClinVar RCV003030713, ExAC rs782334211, Uncertain significance, Atrial fibrillation, familial, 11; Atrial standstill 1
- A69P (p.Ala69Pro), ExAC rs782187661, gnomAD rs782187661, MetaLR 0.98, MetaSVM 1.07
- A69D (p.Ala69Asp), gnomAD 1-147759033-G-T, MetaLR 0.98, MetaSVM 1.07
- F70L (p.Phe70Leu), rs2524611974, ClinGen CA342397735, ClinVar RCV003809064, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- P71P (p.Pro71Pro), rs1663878911, gnomAD 1-147759026-G-A, CADD 13.30
- P71A (p.Pro71Ala), gnomAD 1-147759028-G-C, MetaLR 0.99, MetaSVM 0.98
- P71S (p.Pro71Ser), gnomAD 1-147759028-G-A, MetaLR 0.99, MetaSVM 1.03
- I72S (p.Ile72Ser), NCI-TCGA TCGA novel, gnomAD rs1553227067, MetaLR 0.99, MetaSVM 0.99, Variant assessed as somatic; high impact.
- I72V (p.Ile72Val), Ensembl rs1663878598, MetaLR 0.98, MetaSVM 1.05
- I72T (p.Ile72Thr), gnomAD 1-147759024-A-G, MetaLR 0.99, MetaSVM 0.99
- I72L (p.Ile72Leu), gnomAD 1-147759025-T-G, MetaLR 0.97, MetaSVM 1.09
- S73F (p.Ser73Phe), gnomAD 1-147759021-G-A, MetaLR 0.99, MetaSVM 0.99
- S73Y (p.Ser73Tyr), gnomAD 1-147759021-G-T, MetaLR 0.99, MetaSVM 0.99
- H74N (p.His74Asn), cosmic curated COSV54787, Ensembl rs1663878195, MetaLR 0.97, MetaSVM 1.09
- H74H (p.His74His), rs1446774496, gnomAD 1-147759017-G-A, CADD 10.60
- I75F (p.Ile75Phe), rs587777304, ClinGen CA151265, ClinVar RCV000114757, ClinVar RCV002515789, Uncertain significance, Atrial fibrillation, familial, 11; Atrial standstill 1
- I75V (p.Ile75Val), gnomAD 1-147759016-T-C, MetaLR 0.84, MetaSVM 0.67
- R76C (p.Arg76Cys), NCI-TCGA Cosmic COSV5478, cosmic curated COSV54783, Variant assessed as somatic; moderate impact.
- R76H (p.Arg76His), rs2148959382, ClinGen CA342397604, cosmic curated COSV10808, ClinVar RCV002010955, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- Y77H (p.Tyr77His), rs1663877672, ClinGen CA342397601, ClinVar RCV002033185, Ensembl rs1663877672, MetaLR 0.98, MetaSVM 1.07, Uncertain significance, Atrial fibrillation, familial, 11; Atrial standstill 1
- W78* (p.Trp78Ter), NCI-TCGA Cosmic COSV9960, cosmic curated COSV99605, CADD 37.00, Variant assessed as somatic; high impact.
- W78G (p.Trp78Gly), TOPMed rs1157264363, gnomAD rs1157264363, MetaLR 0.99, MetaSVM 0.97, Uncertain significance, Atrial fibrillation, familial, 11; Atrial standstill 1
- W78L (p.Trp78Leu), cosmic curated COSV10584, MetaLR 0.99, MetaSVM 0.98
- W78R (p.Trp78Arg), TOPMed rs1157264363, gnomAD rs1157264363, MetaLR 0.99, MetaSVM 0.95, Uncertain significance, Inborn genetic diseases
- W78C (p.Trp78Cys), gnomAD 1-147759005-C-A, MetaLR 0.99, MetaSVM 0.96
- V79V (p.Val79Val), gnomAD 1-147759002-C-T, CADD 9.82
- V79A (p.Val79Ala), gnomAD 1-147759003-A-G, MetaLR 0.96, MetaSVM 1.10
- V79C (p.Val79Cys), rs1553227061, gnomAD 1-147759003-AC-A, CADD 29.60
- V79L (p.Val79Leu), gnomAD 1-147759004-C-G, MetaLR 0.97, MetaSVM 1.11
- L80P (p.Leu80Pro), gnomAD 1-147759000-A-G, MetaLR 0.99, MetaSVM 0.99
- Q81* (p.Gln81Ter), Ensembl rs1557943827, Uncertain significance
- Q81Q (p.Gln81Gln), gnomAD 1-147758996-C-T, CADD 9.75
- I82I (p.Ile82Ile), rs1380122320, gnomAD 1-147758993-G-T, CADD 12.10
- I83M (p.Ile83Met), cosmic curated COSV10808, MetaLR 0.94, MetaSVM 1.10
- I83T (p.Ile83Thr), rs1553227059, ClinGen CA342397482, ClinVar RCV003783436, gnomAD rs1553227059, MetaLR 0.98, MetaSVM 1.06, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- F84I (p.Phe84Ile), TOPMed rs1401484116
- F84L (p.Phe84Leu), cosmic curated COSV54785
- F84S (p.Phe84Ser), TOPMed rs1320602673, MetaLR 0.97, MetaSVM 1.10
- V85F (p.Val85Phe), ExAC rs387906613, gnomAD rs387906613, MetaLR 0.99, MetaSVM 1.01, Pathogenic, in ATFB11
- V85I (p.Val85Ile), rs387906613, ClinGen CA128543, NCI-TCGA Cosmic COSV9960, cosmic curated COSV99605, Pathogenic, Atrial fibrillation, familial, 11
- V85V (p.Val85Val), rs782394288, gnomAD 1-147758984-G-T, CADD 2.00
- V85L (p.Val85Leu), gnomAD 1-147758986-C-G, MetaLR 0.98, MetaSVM 1.07
- S86S (p.Ser86Ser), rs782415947, gnomAD 1-147758981-G-A, CADD 12.60
- T87M (p.Thr87Met), NCI-TCGA Cosmic COSV5478, cosmic curated COSV54783, Variant assessed as somatic; moderate impact.
- T87S (p.Thr87Ser), rs1557943770, NCI-TCGA TCGA novel, ClinGen CA342397402, ClinVar RCV000691421, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
- T87T (p.Thr87Thr), rs782281038, gnomAD 1-147758978-C-T, CADD 1.76
- T87K (p.Thr87Lys), gnomAD 1-147758979-G-T, MetaLR 0.98, MetaSVM 1.05
- P88A (p.Pro88Ala), NCI-TCGA TCGA novel, Variant assessed as somatic; moderate impact., in ATRST1
- P88L (p.Pro88Leu), ExAC rs782647757, gnomAD rs782647757, MetaLR 0.99, MetaSVM 1.00
- P88S (p.Pro88Ser), rs121434558, ClinGen CA127022, ClinVar RCV000018522, UniProt VAR 035013, Pathogenic, Atrial fibrillation, somatic
- P88P (p.Pro88Pro), rs782509380, gnomAD 1-147758975-G-A, CADD 2.02
- S89C (p.Ser89Cys), rs2524611740, ClinGen CA342397360, ClinVar RCV002301979, Uncertain significance, Atrial fibrillation, familial, 11; Atrial standstill 1
- L90P (p.Leu90Pro), rs2524611734, ClinGen CA342397350, ClinVar RCV003088406, MetaLR 0.99, MetaSVM 1.01, Uncertain significance, Atrial standstill 1; Atrial fibrillation, familial, 11
Public GJA5 analysis runs
- GJA5 analysis run — GJA5 (884 variants) — completed 2026-08-19