C352F (p.Cys352Phe) variant of GATA2 (P23769)
C352F (p.Cys352Phe) in GATA2 (P23769) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as likely pathogenic in the context of Deafness-lymphedema-leukemia syndrome; GATA2 deficiency with susceptibility to M. The available variant effect predictions contribute to a CATVariant prioritization score of 0.99 / 1. The record also includes structural context.
C352F (p.Cys352Phe) variant details
- p.Cys352Phe
- rs2107668733
- ClinGen CA354413633
- ClinVar RCV001542224
- NCI-TCGA TCGA novel
- Likely pathogenic
- Deafness-lymphedema-leukemia syndrome; GATA2 deficiency with susceptibility to M
- Missense
- Variant Prioritization Score for Impact Estimate 0.987
- AlphaMissense 1.00
- MetaLR 1.00
- MetaSVM 1.52
- PolyPhen-2 1.00
- SIFT 0.00
- EVE 1.00
- ClinVar: Likely pathogenic (Deafness-lymphedema-leukemia syndrome; GATA2 deficiency with sus)
- EBI: Likely pathogenic
- UniProt: Likely pathogenic
- Structural context available