G623S (p.Gly623Ser) variant of COL1A1 (Collagen alpha-1(I) chain)
G623S (p.Gly623Ser) in COL1A1 (Collagen alpha-1(I) chain) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as likely pathogenic in the context of Osteogenesis imperfecta, perinatal lethal. The available variant effect predictions contribute to a CATVariant prioritization score of 0.89 / 1. The record also includes published literature and structural context.
G623S (p.Gly623Ser) variant details
- p.Gly623Ser
- rs2144564489
- ClinGen CA400214781
- ClinVar RCV002278850
- Ensembl rs2144564489
- Likely pathogenic
- Osteogenesis imperfecta, perinatal lethal
- Missense
- Variant Prioritization Score for Impact Estimate 0.892
- ESM-1b 1.00
- AlphaMissense 0.76
- ClinVar: Likely pathogenic (Osteogenesis imperfecta, perinatal lethal)
- EBI: Likely pathogenic
- UniProt: Likely pathogenic
- Structural context available
- Cited in: COL1A1- and COL1A2-Related Osteogenesis Imperfecta. (PMID 20301472)