CEBPB (P17676) variants and mutations
CEBPB (also known as P17676) is a human protein-coding gene encoding a CCAAT/enhancer-binding protein beta protein. It coordinates transcriptional programs involved in inflammation, myeloid differentiation, adipogenesis, metabolism, and cellular stress responses. Dysregulated expression or activity contributes to inflammatory disease and several cancers, particularly through altered differentiation and cytokine signaling. This analysis covers 932 CEBPB variants and mutations. Of these, 96% have computational variant effect predictions. Disease context includes neurodegenerative disease, autoimmune disorder of central nervous system, and bile duct disorder. Example CEBPB variants include Q2*, Q2K, and Q2R.
Variant analysis overview
- Gene: CEBPB
- Protein: P17676
- UniProt accession: P17676
- Organism: Homo sapiens
- Variants analyzed: 932
- Variant scope: all variants
- Completed: 2026-08-22
Variant and mutation evidence
- Variant composition: 413 unspecified-consequence records; 347 missense variants; 103 synonymous variants; 35 frameshift variants; 15 stop-gained variants; 15 in-frame deletions; 4 in-frame insertions; 2 substitution
- Prediction scores: 894 variants have prediction scores (96% of the analyzed set).
Clinical, disease, and population context
- Disease context: 25 disease associations are represented. Top associations: neurodegenerative disease, autoimmune disorder of central nervous system, bile duct disorder, type 2 diabetes mellitus, diabetes mellitus, benign colon neoplasm, breast carcinoma, neoplasm, Alzheimer disease, glioblastoma, breast cancer, cancer.
Protein structure and variant hotspots
- Protein features: 1 domains; 14 post-translational modification sites.
- Structural context: 42 variants have structural context.
- PTM context: 15 variants overlap post-translational modification sites.
Data sources
Evidence in this analysis draws on EBI Proteins Variation, UniProt, gnomAD v4, EuropePMC, Interaction Network Analysis, Protein Data Bank, AlphaFold DB, gnomAD constraint, Open Targets, MaveDB, LitVar.
Notable CEBPB variants
Examples include Q2*, Q2K, Q2R, Q2Q, Q2H, R3C, R3H, R3S. Listed records include available protein-change notation, database identifiers, clinical classifications, computational predictions, population evidence, experimental measurements, and disease context.
- Q2* (p.Gln2Ter), gnomAD rs1174067697, CADD 36.00
- Q2K (p.Gln2Lys), gnomAD 20-50191037-C-A, REVEL 0.05, CADD 21.10
- Q2R (p.Gln2Arg), gnomAD 20-50191038-A-G, REVEL 0.04, CADD 21.80
- Q2Q (p.Gln2Gln), gnomAD 20-50191039-A-G, CADD 14.10
- Q2H (p.Gln2His), gnomAD 20-50191039-A-T, REVEL 0.02, CADD 20.20
- R3C (p.Arg3Cys), TOPMed rs2081571718, REVEL 0.21, CADD 25.40
- R3H (p.Arg3His), gnomAD rs1408002318, REVEL 0.12, CADD 28.80
- R3S (p.Arg3Ser), gnomAD 20-50191040-C-A, REVEL 0.13, CADD 24.30
- R3L (p.Arg3Leu), gnomAD 20-50191041-G-T, REVEL 0.20, CADD 25.40
- R3R (p.Arg3Arg), rs2081571748, gnomAD 20-50191042-C-T, CADD 15.10
- L4L (p.Leu4Leu), rs2081571764, gnomAD 20-50191043-C-T, CADD 14.00
- L4M (p.Leu4Met), gnomAD 20-50191043-C-A, REVEL 0.08, CADD 25.00
- L4P (p.Leu4Pro), gnomAD 20-50191044-T-C, REVEL 0.13, CADD 24.10
- L4Q (p.Leu4Gln), gnomAD 20-50191044-T-A, REVEL 0.23, CADD 26.50
- V5W (p.Val5Trp), gnomAD 20-50191044-TG-T, CADD 28.50
- V5M (p.Val5Met), gnomAD 20-50191046-G-A, REVEL 0.04, CADD 23.30
- V5L (p.Val5Leu), gnomAD 20-50191046-G-C, REVEL 0.03, CADD 20.70
- V5A (p.Val5Ala), gnomAD 20-50191047-T-C, REVEL 0.04, CADD 22.30
- V5V (p.Val5Val), gnomAD 20-50191048-G-A, CADD 13.60
- A6P (p.Ala6Pro), gnomAD 20-50191047-TG-T, CADD 27.00
- A6T (p.Ala6Thr), gnomAD 20-50191049-G-A, REVEL 0.04, CADD 22.50
- A6S (p.Ala6Ser), gnomAD 20-50191049-G-T, REVEL 0.04, CADD 21.60
- A6D (p.Ala6Asp), gnomAD 20-50191050-C-A, REVEL 0.04, CADD 20.60
- A6V (p.Ala6Val), gnomAD 20-50191050-C-T, REVEL 0.04, CADD 22.50
- A6A (p.Ala6Ala), rs765852624, gnomAD 20-50191051-C-G, CADD 14.80
- W7C (p.Trp7Cys), ExAC rs751204816, TOPMed rs751204816, gnomAD rs751204816, REVEL 0.41, CADD 29.80
- W7R (p.Trp7Arg), gnomAD 20-50191052-T-A, REVEL 0.18, CADD 24.10
- W7G (p.Trp7Gly), gnomAD 20-50191052-T-G, REVEL 0.38, CADD 24.80
- W7* (p.Trp7Ter), gnomAD 20-50191053-G-A, CADD 36.00
- W7L (p.Trp7Leu), gnomAD 20-50191053-G-T, REVEL 0.25, CADD 24.40
- D8N (p.Asp8Asn), TOPMed rs1258959413, REVEL 0.17, CADD 23.90
- D8T (p.Asp8Thr), gnomAD 20-50191052-TG-T, CADD 26.90
- D8Y (p.Asp8Tyr), gnomAD 20-50191055-G-T, REVEL 0.22, CADD 25.60
- D8G (p.Asp8Gly), gnomAD 20-50191056-A-G, REVEL 0.16, CADD 24.00
- D8D (p.Asp8Asp), gnomAD 20-50191057-C-T, CADD 14.10
- D8E (p.Asp8Glu), gnomAD 20-50191057-C-A, REVEL 0.12, CADD 23.20
- P9Q (p.Pro9Gln), gnomAD 20-50191056-AC-A, CADD 26.30
- P9S (p.Pro9Ser), gnomAD 20-50191058-C-T, REVEL 0.05, CADD 18.20
- P9T (p.Pro9Thr), gnomAD 20-50191058-C-A, REVEL 0.05, CADD 19.40
- P9L (p.Pro9Leu), gnomAD 20-50191059-C-T, REVEL 0.06, CADD 23.70
- P9P (p.Pro9Pro), gnomAD 20-50191060-A-T, CADD 15.40
- A10G (p.Ala10Gly), ExAC rs759182476, gnomAD rs759182476, REVEL 0.07, CADD 23.60
- A10T (p.Ala10Thr), Ensembl rs2081571858, REVEL 0.03, CADD 23.70
- A10P (p.Ala10Pro), gnomAD 20-50191061-G-C, REVEL 0.19, CADD 25.70
- A10S (p.Ala10Ser), gnomAD 20-50191061-G-T, REVEL 0.04, CADD 23.30
- A10V (p.Ala10Val), gnomAD 20-50191062-C-T, REVEL 0.05, CADD 23.60
- A10E (p.Ala10Glu), gnomAD 20-50191062-C-A, REVEL 0.08, CADD 23.70
- A10A (p.Ala10Ala), gnomAD 20-50191063-A-G, CADD 15.80
- C11R (p.Cys11Arg), gnomAD 20-50191064-T-C, REVEL 0.27, CADD 26.20
- C11F (p.Cys11Phe), gnomAD 20-50191065-G-T, REVEL 0.21, CADD 25.60
- C11S (p.Cys11Ser), gnomAD 20-50191065-G-C, REVEL 0.24, CADD 25.10
- C11Y (p.Cys11Tyr), gnomAD 20-50191065-G-A, REVEL 0.24, CADD 25.40
- C11C (p.Cys11Cys), gnomAD 20-50191066-T-C, CADD 14.60
- C11* (p.Cys11Ter), gnomAD 20-50191066-T-A, CADD 35.00
- L12P (p.Leu12Pro), Ensembl rs1568673101, REVEL 0.16, CADD 24.10
- L12F (p.Leu12Phe), gnomAD 20-50191067-C-T, REVEL 0.08, CADD 25.20
- L12I (p.Leu12Ile), gnomAD 20-50191067-C-A, REVEL 0.06, CADD 23.30
- L12R (p.Leu12Arg), gnomAD 20-50191068-T-G, REVEL 0.19, CADD 26.80
- L12H (p.Leu12His), gnomAD 20-50191068-T-A, REVEL 0.16, CADD 26.70
- L12L (p.Leu12Leu), rs767822906, gnomAD 20-50191069-C-G, CADD 10.80
- P13S (p.Pro13Ser), gnomAD 20-50191070-C-T, REVEL 0.06, CADD 19.90
- P13T (p.Pro13Thr), gnomAD 20-50191070-C-A, REVEL 0.08, CADD 20.40
- P13H (p.Pro13His), gnomAD 20-50191071-C-A, REVEL 0.13, CADD 25.00
- P13R (p.Pro13Arg), gnomAD 20-50191071-C-G, REVEL 0.13, CADD 23.50
- P13L (p.Pro13Leu), gnomAD 20-50191071-C-T, REVEL 0.08, CADD 19.60
- P13P (p.Pro13Pro), gnomAD 20-50191072-C-A, CADD 12.30
- L14P (p.Leu14Pro), gnomAD 20-50191068-T-TC, CADD 27.10
- L14C (p.Leu14Cys), rs1568673103, gnomAD 20-50191068-TC-T, CADD 24.20
- L14del (p.Leu14del), gnomAD 20-50191072-CCTG-, CADD 18.20
- L14M (p.Leu14Met), gnomAD 20-50191073-C-A, REVEL 0.05, CADD 18.20
- L14L (p.Leu14Leu), rs1327602797, gnomAD 20-50191073-C-T, CADD 12.30
- L14R (p.Leu14Arg), gnomAD 20-50191073-CT-C, CADD 25.50
- P15S (p.Pro15Ser), rs2081572025, ClinGen CA408947342, ClinVar RCV004431198, Ensembl rs2081572025, REVEL 0.04, CADD 21.10, Uncertain significance, not specified
- P15T (p.Pro15Thr), gnomAD 20-50191076-C-A, REVEL 0.05, CADD 20.50
- P15R (p.Pro15Arg), gnomAD 20-50191077-C-G, REVEL 0.06, CADD 21.30
- P15L (p.Pro15Leu), gnomAD 20-50191077-C-T, REVEL 0.11, CADD 19.10
- P15Q (p.Pro15Gln), gnomAD 20-50191077-C-A, REVEL 0.07, CADD 20.40
- P15P (p.Pro15Pro), gnomAD 20-50191078-G-T, CADD 14.00
- P16T (p.Pro16Thr), gnomAD 20-50191079-C-A, REVEL 0.12, CADD 24.10
- P16S (p.Pro16Ser), gnomAD 20-50191079-C-T, REVEL 0.12, CADD 24.30
- P16Q (p.Pro16Gln), gnomAD 20-50191080-C-A, REVEL 0.09, CADD 23.40
- P16L (p.Pro16Leu), gnomAD 20-50191080-C-T, REVEL 0.10, CADD 25.10
- P16P (p.Pro16Pro), gnomAD 20-50191081-G-C, CADD 13.80
- P17L (p.Pro17Leu), gnomAD rs1326067176, REVEL 0.06, CADD 23.40
- P17S (p.Pro17Ser), Ensembl rs2081572082, REVEL 0.10, CADD 23.50
- P17T (p.Pro17Thr), gnomAD 20-50191082-C-A, REVEL 0.11, CADD 24.60
- P17Q (p.Pro17Gln), gnomAD 20-50191083-C-A, REVEL 0.11, CADD 25.10
- P17P (p.Pro17Pro), rs754328755, gnomAD 20-50191084-G-A, CADD 14.20
- P18L (p.Pro18Leu), TOPMed rs1041584212, REVEL 0.07, CADD 23.50
- P18S (p.Pro18Ser), TOPMed rs1260313083, gnomAD rs1260313083, REVEL 0.03, CADD 23.20
- p.Pro18 Pro19del, rs760594355, gnomAD 20-50191074-TGCCG, CADD 19.50
- P18T (p.Pro18Thr), gnomAD 20-50191085-C-A, REVEL 0.04, CADD 23.10
- P18R (p.Pro18Arg), gnomAD 20-50191086-C-G, REVEL 0.07, CADD 23.10
- P18P (p.Pro18Pro), rs561578327, gnomAD 20-50191087-G-A, CADD 12.90
- P19L (p.Pro19Leu), gnomAD rs1206905908, REVEL 0.09, CADD 25.50
- P19del (p.Pro19del), rs760594355, gnomAD 20-50191074-TGCC-, CADD 15.30
- p.Pro19dup, rs760594355, gnomAD 20-50191074-T-TGC, CADD 18.50
- P19A (p.Pro19Ala), gnomAD 20-50191086-C-CT, CADD 25.90
- P19T (p.Pro19Thr), gnomAD 20-50191088-C-A, REVEL 0.03, CADD 22.60
- P19S (p.Pro19Ser), gnomAD 20-50191088-C-T, REVEL 0.05, CADD 19.80
- P19H (p.Pro19His), gnomAD 20-50191089-C-A, REVEL 0.09, CADD 25.40
- P19P (p.Pro19Pro), gnomAD 20-50191090-T-C, CADD 14.50
- p.Pro19 Ala20insGlnGlyGlyAlaGlyL, gnomAD 20-50191090-T-TCA, CADD 20.40
- A20S (p.Ala20Ser), TOPMed rs1000008468, gnomAD rs1000008468, REVEL 0.06, CADD 23.70
- A20V (p.Ala20Val), 1000Genomes rs377368819, ESP rs377368819, ExAC rs377368819, TOPMed rs377368819, REVEL 0.05, CADD 25.40
- A20P (p.Ala20Pro), gnomAD 20-50191091-G-C, REVEL 0.07, CADD 24.10
- A20T (p.Ala20Thr), gnomAD 20-50191091-G-A, REVEL 0.06, CADD 26.40
- p.Ala20 Phe21insGluLeuLysAlaGluP, gnomAD 20-50191092-C-CCG, CADD 19.00
- A20D (p.Ala20Asp), gnomAD 20-50191092-C-A, REVEL 0.08, CADD 25.40
- A20A (p.Ala20Ala), gnomAD 20-50191093-C-A, CADD 14.00
- F21C (p.Phe21Cys), Ensembl rs2081572286, REVEL 0.09, CADD 24.50
- F21L (p.Phe21Leu), gnomAD rs2081572251, REVEL 0.03, CADD 23.00
- F21E (p.Phe21Glu), gnomAD 20-50191088-C-CCC, CADD 25.40
- F21V (p.Phe21Val), gnomAD 20-50191094-T-G, REVEL 0.02, CADD 22.80
- F21I (p.Phe21Ile), gnomAD 20-50191094-T-A, REVEL 0.03, CADD 22.80
- F21S (p.Phe21Ser), gnomAD 20-50191095-T-C, REVEL 0.06, CADD 24.70
- F21F (p.Phe21Phe), gnomAD 20-50191096-T-C, CADD 15.60
- K22E (p.Lys22Glu), TOPMed rs2081572306, REVEL 0.05, CADD 24.10
- K22* (p.Lys22Ter), gnomAD 20-50191097-A-T, CADD 36.00
- K22R (p.Lys22Arg), gnomAD 20-50191098-A-G, REVEL 0.05, CADD 21.30
- K22N (p.Lys22Asn), gnomAD 20-50191099-A-C, REVEL 0.04, CADD 22.80
- K22K (p.Lys22Lys), rs1431202145, gnomAD 20-50191099-A-G, CADD 15.00
- S23F (p.Ser23Phe), TOPMed rs1034526659, REVEL 0.14, CADD 26.40
- S23P (p.Ser23Pro), gnomAD 20-50191100-T-C, REVEL 0.02, CADD 22.60
- S23Y (p.Ser23Tyr), gnomAD 20-50191101-C-A, REVEL 0.14, CADD 25.60
- S23S (p.Ser23Ser), rs1411461744, gnomAD 20-50191102-C-T, CADD 15.00
- M24T (p.Met24Thr), ExAC rs746123580, TOPMed rs746123580, gnomAD rs746123580, REVEL 0.31, CADD 26.10
- M24V (p.Met24Val), Ensembl rs2081572388, REVEL 0.25, CADD 25.60
- M24L (p.Met24Leu), gnomAD 20-50191103-A-C, REVEL 0.32, CADD 26.30
- M24K (p.Met24Lys), gnomAD 20-50191104-T-A, REVEL 0.41, CADD 27.10
- M24I (p.Met24Ile), gnomAD 20-50191105-G-A, REVEL 0.29, CADD 26.60
- E25D (p.Glu25Asp), gnomAD rs1157927460, REVEL 0.21, CADD 24.10
- E25* (p.Glu25Ter), gnomAD 20-50191106-G-T, CADD 37.00
- E25K (p.Glu25Lys), gnomAD 20-50191106-G-A, REVEL 0.32, CADD 29.70
- E25G (p.Glu25Gly), gnomAD 20-50191107-A-G, REVEL 0.43, CADD 28.80
- E25V (p.Glu25Val), gnomAD 20-50191107-A-T, REVEL 0.46, CADD 28.50
- E25E (p.Glu25Glu), gnomAD 20-50191108-A-G, CADD 15.10
- V26A (p.Val26Ala), gnomAD rs1361637653, REVEL 0.16, CADD 26.60
- V26L (p.Val26Leu), gnomAD rs1422775925, REVEL 0.10, CADD 26.30
- V26M (p.Val26Met), gnomAD 20-50191109-G-A, REVEL 0.16, CADD 27.20
- V26V (p.Val26Val), gnomAD 20-50191111-G-T, CADD 13.50
- A27T (p.Ala27Thr), ExAC rs772304270, TOPMed rs772304270, gnomAD rs772304270, REVEL 0.22, CADD 24.90
- A27V (p.Ala27Val), TOPMed rs2081572501, gnomAD rs2081572501, REVEL 0.28, CADD 26.90
- A27S (p.Ala27Ser), gnomAD 20-50191112-G-T, REVEL 0.16, CADD 25.90
- A27G (p.Ala27Gly), gnomAD 20-50191113-C-G, REVEL 0.18, CADD 24.00
- A27D (p.Ala27Asp), gnomAD 20-50191113-C-A, REVEL 0.39, CADD 27.10
- A27A (p.Ala27Ala), rs2147338163, gnomAD 20-50191114-C-T, CADD 15.40
- N28D (p.Asn28Asp), gnomAD 20-50191115-A-G, REVEL 0.11, CADD 24.30
- N28H (p.Asn28His), gnomAD 20-50191115-A-C, REVEL 0.11, CADD 25.70
- N28S (p.Asn28Ser), gnomAD 20-50191116-A-G, REVEL 0.11, CADD 22.60
- N28K (p.Asn28Lys), gnomAD 20-50191117-C-A, REVEL 0.08, CADD 24.80
- F29L (p.Phe29Leu), NCI-TCGA Cosmic COSV1002, REVEL 0.09, CADD 22.50, Variant assessed as somatic; moderate impact.
- F29I (p.Phe29Ile), gnomAD 20-50191118-T-A, REVEL 0.14, CADD 22.90
- F29V (p.Phe29Val), gnomAD 20-50191118-T-G, REVEL 0.21, CADD 23.10
- F29S (p.Phe29Ser), gnomAD 20-50191119-T-C, REVEL 0.35, CADD 29.80
- Y30F (p.Tyr30Phe), ExAC rs781028963, TOPMed rs781028963, gnomAD rs781028963, REVEL 0.30, CADD 24.80, Uncertain significance, not specified
- Y30H (p.Tyr30His), TOPMed rs1411297267, gnomAD rs1411297267, REVEL 0.34, CADD 28.10
- Y30N (p.Tyr30Asn), gnomAD 20-50191121-T-A, REVEL 0.37, CADD 28.20
- Y30C (p.Tyr30Cys), gnomAD 20-50191122-A-G, REVEL 0.42, CADD 29.90
- Y30* (p.Tyr30Ter), gnomAD 20-50191123-C-A, CADD 36.00
- Y31C (p.Tyr31Cys), gnomAD rs1404927663, REVEL 0.24, CADD 29.00
- Y31H (p.Tyr31His), ExAC rs747920655, TOPMed rs747920655, gnomAD rs747920655, REVEL 0.08, CADD 24.60
- Y31N (p.Tyr31Asn), ExAC rs747920655, TOPMed rs747920655, gnomAD rs747920655, REVEL 0.06, CADD 23.00
- Y31del (p.Tyr31del), gnomAD 20-50191119-TCTA-, CADD 21.20
- Y31* (p.Tyr31Ter), gnomAD 20-50191126-C-A, CADD 36.00
- Y31Y (p.Tyr31Tyr), gnomAD 20-50191126-C-T, CADD 12.90
- E32K (p.Glu32Lys), TOPMed rs1301797980, gnomAD rs1301797980, REVEL 0.17, CADD 27.00
- E32Q (p.Glu32Gln), TOPMed rs1301797980, gnomAD rs1301797980, REVEL 0.15, CADD 26.00
- E32* (p.Glu32Ter), gnomAD 20-50191127-G-T, CADD 36.00
- E32G (p.Glu32Gly), gnomAD 20-50191128-A-G, REVEL 0.07, CADD 24.40
- E32D (p.Glu32Asp), gnomAD 20-50191129-G-T, REVEL 0.07, CADD 22.10
- E32E (p.Glu32Glu), gnomAD 20-50191129-G-A, CADD 13.80
- A33V (p.Ala33Val), TOPMed rs1179373108, gnomAD rs1179373108, REVEL 0.03, CADD 22.60
- A33T (p.Ala33Thr), gnomAD 20-50191130-G-A, REVEL 0.03, CADD 21.60
- A33G (p.Ala33Gly), gnomAD 20-50191130-GC-G, CADD 27.10
- A33S (p.Ala33Ser), gnomAD 20-50191130-G-T, REVEL 0.03, CADD 19.90
- A33E (p.Ala33Glu), gnomAD 20-50191131-C-A, REVEL 0.05, CADD 22.70
- A33A (p.Ala33Ala), gnomAD 20-50191132-G-C, CADD 14.60
- D34E (p.Asp34Glu), ExAC rs769517052, TOPMed rs769517052, gnomAD rs769517052, REVEL 0.08, CADD 24.90
- D34G (p.Asp34Gly), 1000Genomes rs2147338198, REVEL 0.07, CADD 23.00
Public CEBPB analysis runs
- CEBPB analysis run — CEBPB (932 variants) — completed 2026-08-22