R897T (p.Arg897Thr) variant of CACNA1S (Q13698)
R897T (p.Arg897Thr) in CACNA1S (Q13698) is a missense change. Clinical records from ClinVar, EBI, and UniProt describe it as pathogenic/likely pathogenic in the context of not provided; Malignant hyperthermia, susceptibility to, 5; Hypokalemic periodic. The available variant effect predictions contribute to a CATVariant prioritization score of 0.78 / 1. The record also includes published literature and structural context.
R897T (p.Arg897Thr) variant details
- p.Arg897Thr
- rs1287079817
- ClinGen CA344102559
- ClinVar RCV000853588
- ClinVar RCV001310556
- Pathogenic/Likely pathogenic
- not provided; Malignant hyperthermia, susceptibility to, 5; Hypokalemic periodic
- Missense
- Variant Prioritization Score for Impact Estimate 0.781
- AlphaMissense 0.62
- MetaLR 0.94
- MetaSVM 1.12
- PolyPhen-2 0.01
- SIFT 0.00
- EVE 0.66
- ClinVar: Pathogenic/Likely pathogenic (not provided; Malignant hyperthermia, susceptibility to, 5; Hypo)
- EBI: Pathogenic
- UniProt: Pathogenic
- Structural context available
- Cited in: EFNS guidelines on the molecular diagnosis of channelopathies, epilepsies, migraine, stroke, and dementias. (PMID 20298421)
- Cited in: Hypokalemic Periodic Paralysis. (PMID 20301512)