I15T (p.Ile15Thr) variant of BRCA1 (P38398)
I15T (p.Ile15Thr) in BRCA1 (P38398) is a missense change. Clinical records from EBI and UniProt describe it as uncertain significance. The available variant effect predictions contribute to a CATVariant prioritization score of 0.56 / 1. The record also includes population frequency data, experimental measurements, published literature, and structural context.
I15T (p.Ile15Thr) variant details
- p.Ile15Thr
- rs80357316
- ClinGen CA002886
- ClinVar RCV000111641
- ClinVar RCV000582098
- Uncertain significance
- Missense
- Variant Prioritization Score for Impact Estimate 0.564
- REVEL 0.59
- AlphaMissense 0.89
- MetaLR 0.39
- MetaSVM -0.24
- CADD 23.70
- PolyPhen-2 0.06
- EBI: Variant of uncertain significance
- UniProt: Uncertain significance
- Most common in the 1KG:IBS population (allele frequency 0.017)
- Structural context available
- BRCA1 SGE Exon 2 Replicate 2: score 0.0141
- Cited in: Genetic cancer risk assessment and counseling: recommendations of the national society of genetic counselors. (PMID 15604628)
- Cited in: American Cancer Society guidelines for breast screening with MRI as an adjunct to mammography. (PMID 17392385)