Lymphoproliferative disorder: genes and variants
Explore variant evidence for Lymphoproliferative disorder across 1 analyzed protein (ITK). Linked ClinVar records include 2 pathogenic or likely pathogenic variants, 171 variants of uncertain significance and 9 with conflicting classifications.
Coverage includes proteins already analyzed in CATVariant, not every gene involved in this condition. Database links are associations, not an assessment of clinical gene–disease validity. Computable evidence prioritizes variants for expert review and does not reclassify them. Source labels are pooled across this disease family.
Data updated 2026-10-11. Automated aggregation, not a clinical review date.
Download variant evidence (CSV)
Genes linked to Lymphoproliferative disorder
ITK: Tyrosine-protein kinase ITK/TSK
A Tec-family kinase that relays T-cell receptor signals needed for T-cell development and activation. Deficiency can cause combined immunodeficiency.
2 ClinVar pathogenic / likely pathogenic and 179 uncertain variants in ITK have source records linked to Lymphoproliferative disorder. Association strength is not clinical gene validity.
Weakly linked (only a few uncertain records): SH2D1A.
ClinVar pathogenic and likely pathogenic variants linked to Lymphoproliferative disorder
| Variant | Position | Protein part | Clinical label |
|---|---|---|---|
| ITK R29H | 29 | PH | Pathogenic / likely pathogenic (★★) |
| ITK R335W | 335 | SH2 | Pathogenic / likely pathogenic (★) |
Diseases related to Lymphoproliferative disorder
- Autoinflammatory syndrome, also linked to ITK
- Renal cell carcinoma, also linked to ITK
Frequently asked questions
Which genes have records linked to Lymphoproliferative disorder?
This view contains 1 analyzed proteins: ITK. Links come from clinical records and association databases. They do not imply that every listed gene is a validated cause, and missing genes may not yet be analyzed.
What do the clinical classifications mean?
Linked records include 2 pathogenic or likely pathogenic variants, 171 variants of uncertain significance and 9 with conflicting classifications. Labels summarize source records; multi-condition records may not make a separate assertion for this disease. Check the original record and review status.
Does the evidence score change a VUS classification?
No. 0 VUS or conflicting variants reach the likely-pathogenic points range on the computable criteria available here. This is a research prioritization signal, not a clinical classification. Patient, family and other required evidence may be missing.
Can I download the variant evidence?
Download the CSV for all 199 variants in the selected disease scope, including clinical labels, review status, evidence criteria, predictor scores, functional measurements and population frequency where available.
About this data
Variant–disease links come from ClinVar, Open Targets and UniProt, pooled from eligible public CATVariant analyses of each human protein. Evidence scores use the ACMG/AMP Bayesian points scale with computable criteria only (position among known disease variants, rarity in gnomAD, calibrated predictors, deep mutational scanning); there is no family or patient data, so they prioritise variants for expert review and never classify them.
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